Detailed information
Bioinformatically predicted
Overview
| Name | comEA | Type | Machinery gene |
| Locus tag | C2U30_RS09995 | Genome accession | NZ_CP026122 |
| Coordinates | 2177921..2178238 (+) | Length | 105 a.a. |
| NCBI ID | WP_039041323.1 | Uniprot ID | A0AAJ5ZCA1 |
| Organism | Aeromonas sp. ASNIH5 | ||
| Function | dsDNA binding (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 2172921..2183238
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| C2U30_RS09970 (C2U30_09975) | - | 2173615..2174247 (-) | 633 | WP_039041319.1 | hemolysin III family protein | - |
| C2U30_RS09975 (C2U30_09980) | - | 2174439..2175944 (+) | 1506 | WP_103243667.1 | aminotransferase class V-fold PLP-dependent enzyme | - |
| C2U30_RS09980 (C2U30_09985) | - | 2176050..2176601 (+) | 552 | WP_045521880.1 | septation protein A | - |
| C2U30_RS09985 (C2U30_09990) | - | 2176626..2176922 (+) | 297 | WP_010675539.1 | YciI family protein | - |
| C2U30_RS09990 (C2U30_09995) | cysQ | 2176986..2177756 (-) | 771 | WP_039041322.1 | 3'(2'),5'-bisphosphate nucleotidase CysQ | - |
| C2U30_RS09995 (C2U30_10000) | comEA | 2177921..2178238 (+) | 318 | WP_039041323.1 | ComEA family DNA-binding protein | Machinery gene |
| C2U30_RS10000 (C2U30_10005) | galU | 2178333..2179244 (+) | 912 | WP_103243668.1 | UTP--glucose-1-phosphate uridylyltransferase GalU | - |
| C2U30_RS10005 (C2U30_10010) | - | 2179458..2180855 (+) | 1398 | WP_029314796.1 | peptide MFS transporter | - |
| C2U30_RS10010 (C2U30_10015) | - | 2180926..2181897 (-) | 972 | WP_029314797.1 | response regulator | - |
| C2U30_RS10015 (C2U30_10020) | - | 2182173..2182847 (+) | 675 | WP_039041329.1 | DnaT-like ssDNA-binding domain-containing protein | - |
Sequence
Protein
Download Length: 105 a.a. Molecular weight: 10966.84 Da Isoelectric Point: 10.1059
>NTDB_id=267320 C2U30_RS09995 WP_039041323.1 2177921..2178238(+) (comEA) [Aeromonas sp. ASNIH5]
MNKKTLIAALLLGCLPLLSQPLLAADKAATKPVATTQVKESGKINLNTASAGELTALKGIGEKKAQAIIDHREKQGKFTS
VDQLADVSGIGSATLEANRDMIIVK
MNKKTLIAALLLGCLPLLSQPLLAADKAATKPVATTQVKESGKINLNTASAGELTALKGIGEKKAQAIIDHREKQGKFTS
VDQLADVSGIGSATLEANRDMIIVK
Nucleotide
Download Length: 318 bp
>NTDB_id=267320 C2U30_RS09995 WP_039041323.1 2177921..2178238(+) (comEA) [Aeromonas sp. ASNIH5]
ATGAACAAGAAGACCCTGATCGCCGCACTACTGCTGGGCTGCCTCCCCCTGTTGAGCCAACCTCTGCTGGCCGCCGACAA
GGCGGCGACCAAGCCTGTGGCCACCACCCAAGTCAAGGAGAGCGGCAAGATCAATCTCAATACCGCCAGTGCCGGCGAGC
TCACCGCCCTGAAGGGCATTGGCGAGAAGAAGGCACAGGCCATCATCGACCACAGGGAGAAGCAGGGCAAGTTCACCTCC
GTCGATCAACTGGCGGACGTCAGTGGAATCGGATCGGCCACGCTGGAAGCAAACCGGGACATGATTATCGTCAAGTAA
ATGAACAAGAAGACCCTGATCGCCGCACTACTGCTGGGCTGCCTCCCCCTGTTGAGCCAACCTCTGCTGGCCGCCGACAA
GGCGGCGACCAAGCCTGTGGCCACCACCCAAGTCAAGGAGAGCGGCAAGATCAATCTCAATACCGCCAGTGCCGGCGAGC
TCACCGCCCTGAAGGGCATTGGCGAGAAGAAGGCACAGGCCATCATCGACCACAGGGAGAAGCAGGGCAAGTTCACCTCC
GTCGATCAACTGGCGGACGTCAGTGGAATCGGATCGGCCACGCTGGAAGCAAACCGGGACATGATTATCGTCAAGTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comEA | Vibrio cholerae C6706 |
50 |
100 |
0.505 |
| comEA | Vibrio cholerae strain A1552 |
50 |
100 |
0.505 |
| comEA/comE1 | Glaesserella parasuis strain SC1401 |
47.664 |
100 |
0.486 |
| comE1/comEA | Haemophilus influenzae Rd KW20 |
45.045 |
100 |
0.476 |
| comEA | Legionella pneumophila strain ERS1305867 |
44 |
95.238 |
0.419 |
| comEA | Legionella pneumophila str. Paris |
44 |
95.238 |
0.419 |
| comEA/celA/cilE | Streptococcus mitis NCTC 12261 |
51.852 |
77.143 |
0.4 |
| comEA | Vibrio parahaemolyticus RIMD 2210633 |
43.75 |
91.429 |
0.4 |
| comEA/celA/cilE | Streptococcus mitis SK321 |
54.795 |
69.524 |
0.381 |