Detailed information
Bioinformatically predicted
Overview
| Name | comEA | Type | Machinery gene |
| Locus tag | C1C92_RS02140 | Genome accession | NZ_CP025705 |
| Coordinates | 479095..479412 (+) | Length | 105 a.a. |
| NCBI ID | WP_010675541.1 | Uniprot ID | A0A3G9I3Z2 |
| Organism | Aeromonas caviae strain R25-6 | ||
| Function | dsDNA binding (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 474095..484412
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| C1C92_RS02115 (C1C92_02115) | trhA | 474787..475419 (-) | 633 | WP_113068927.1 | PAQR family membrane homeostasis protein TrhA | - |
| C1C92_RS02120 (C1C92_02120) | - | 475611..477116 (+) | 1506 | WP_113068928.1 | aminotransferase class V-fold PLP-dependent enzyme | - |
| C1C92_RS02125 (C1C92_02125) | - | 477222..477773 (+) | 552 | WP_039041321.1 | septation protein A | - |
| C1C92_RS02130 (C1C92_02130) | - | 477798..478094 (+) | 297 | WP_113068929.1 | YciI family protein | - |
| C1C92_RS02135 (C1C92_02135) | cysQ | 478158..478928 (-) | 771 | WP_113068930.1 | 3'(2'),5'-bisphosphate nucleotidase CysQ | - |
| C1C92_RS02140 (C1C92_02140) | comEA | 479095..479412 (+) | 318 | WP_010675541.1 | ComEA family DNA-binding protein | Machinery gene |
| C1C92_RS02145 (C1C92_02145) | galU | 479507..480418 (+) | 912 | WP_010675542.1 | UTP--glucose-1-phosphate uridylyltransferase GalU | - |
| C1C92_RS02150 (C1C92_02150) | - | 480632..482029 (+) | 1398 | WP_029314796.1 | peptide MFS transporter | - |
| C1C92_RS02155 (C1C92_02155) | - | 482100..483071 (-) | 972 | WP_029314797.1 | response regulator | - |
| C1C92_RS02160 (C1C92_02160) | - | 483347..484021 (+) | 675 | WP_039041329.1 | DnaT-like ssDNA-binding domain-containing protein | - |
Sequence
Protein
Download Length: 105 a.a. Molecular weight: 11006.90 Da Isoelectric Point: 10.1059
>NTDB_id=263461 C1C92_RS02140 WP_010675541.1 479095..479412(+) (comEA) [Aeromonas caviae strain R25-6]
MNKKTLIAALLLSCLPLLSQPLLAADKAATKPVATTQVKESGKINLNTASAGELTALKGIGEKKAQAIIDHREKQGKFTS
VDQLADVSGIGPATLEANRDMIIVK
MNKKTLIAALLLSCLPLLSQPLLAADKAATKPVATTQVKESGKINLNTASAGELTALKGIGEKKAQAIIDHREKQGKFTS
VDQLADVSGIGPATLEANRDMIIVK
Nucleotide
Download Length: 318 bp
>NTDB_id=263461 C1C92_RS02140 WP_010675541.1 479095..479412(+) (comEA) [Aeromonas caviae strain R25-6]
ATGAACAAGAAGACCCTGATCGCCGCACTGCTGCTGAGCTGCCTCCCCCTGTTGAGCCAACCTCTGCTGGCCGCCGACAA
GGCGGCGACCAAGCCTGTGGCCACCACCCAAGTCAAGGAGAGCGGCAAGATCAATCTCAATACCGCCAGTGCCGGCGAGC
TCACCGCCCTGAAAGGCATTGGCGAGAAGAAGGCACAGGCCATCATCGACCACAGGGAGAAGCAGGGCAAGTTCACCTCC
GTCGATCAACTGGCGGACGTCAGTGGCATCGGACCTGCCACGCTGGAAGCAAACCGGGACATGATTATCGTCAAGTAA
ATGAACAAGAAGACCCTGATCGCCGCACTGCTGCTGAGCTGCCTCCCCCTGTTGAGCCAACCTCTGCTGGCCGCCGACAA
GGCGGCGACCAAGCCTGTGGCCACCACCCAAGTCAAGGAGAGCGGCAAGATCAATCTCAATACCGCCAGTGCCGGCGAGC
TCACCGCCCTGAAAGGCATTGGCGAGAAGAAGGCACAGGCCATCATCGACCACAGGGAGAAGCAGGGCAAGTTCACCTCC
GTCGATCAACTGGCGGACGTCAGTGGCATCGGACCTGCCACGCTGGAAGCAAACCGGGACATGATTATCGTCAAGTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comEA | Vibrio cholerae C6706 |
50.943 |
100 |
0.514 |
| comEA | Vibrio cholerae strain A1552 |
50.943 |
100 |
0.514 |
| comE1/comEA | Haemophilus influenzae Rd KW20 |
45.045 |
100 |
0.476 |
| comEA/comE1 | Glaesserella parasuis strain SC1401 |
46.535 |
96.19 |
0.448 |
| comEA | Legionella pneumophila strain ERS1305867 |
44 |
95.238 |
0.419 |
| comEA | Legionella pneumophila str. Paris |
44 |
95.238 |
0.419 |
| comEA/celA/cilE | Streptococcus mitis NCTC 12261 |
51.852 |
77.143 |
0.4 |
| comEA | Vibrio parahaemolyticus RIMD 2210633 |
43.75 |
91.429 |
0.4 |
| comEA/celA/cilE | Streptococcus mitis SK321 |
54.795 |
69.524 |
0.381 |
| comEA | Acinetobacter baylyi ADP1 |
46.914 |
77.143 |
0.362 |