Detailed information    

insolico Bioinformatically predicted

Overview

Name   comEA/celA/cilE   Type   Machinery gene
Locus tag   DLJ52_RS02915 Genome accession   NZ_CP029559
Coordinates   561410..562069 (+) Length   219 a.a.
NCBI ID   WP_002962411.1    Uniprot ID   A0ABM6W6B2
Organism   Streptococcus sobrinus strain NIDR 6715-15     
Function   dsDNA binding to the cell surface (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 556410..567069
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  DLJ52_RS02885 (DLJ52_02885) - 556974..557375 (+) 402 WP_019769462.1 DUF948 domain-containing protein -
  DLJ52_RS02890 (DLJ52_02890) - 557375..557797 (+) 423 WP_002962402.1 YtxH domain-containing protein -
  DLJ52_RS02895 (DLJ52_02895) - 557996..558808 (+) 813 WP_019772312.1 DUF6612 family protein -
  DLJ52_RS02900 (DLJ52_02900) - 559019..559318 (-) 300 WP_019770143.1 DUF3270 domain-containing protein -
  DLJ52_RS02905 (DLJ52_02905) - 559520..560449 (+) 930 WP_002962408.1 peptidase U32 family protein -
  DLJ52_RS02910 (DLJ52_02910) - 560459..561199 (+) 741 WP_019769805.1 1-acyl-sn-glycerol-3-phosphate acyltransferase -
  DLJ52_RS02915 (DLJ52_02915) comEA/celA/cilE 561410..562069 (+) 660 WP_002962411.1 helix-hairpin-helix domain-containing protein Machinery gene
  DLJ52_RS02920 (DLJ52_02920) comEC/celB 562066..564297 (+) 2232 WP_019772311.1 DNA internalization-related competence protein ComEC/Rec2 Machinery gene
  DLJ52_RS02925 (DLJ52_02925) - 564440..565441 (+) 1002 WP_109982470.1 DUF805 domain-containing protein -
  DLJ52_RS02930 (DLJ52_02930) - 565452..566063 (+) 612 Protein_529 DUF805 domain-containing protein -
  DLJ52_RS02935 (DLJ52_02935) - 566141..566536 (+) 396 WP_019776826.1 TM2 domain-containing protein -

Sequence

Protein


Download         Length: 219 a.a.        Molecular weight: 22987.68 Da        Isoelectric Point: 4.9915

>NTDB_id=254081 DLJ52_RS02915 WP_002962411.1 561410..562069(+) (comEA/celA/cilE) [Streptococcus sobrinus strain NIDR 6715-15]
MIEDWIEKIKENKLVVGLVLAIVVLAGALFLNLANGNGRSAKSQANFPSMASTSQTSQGSTSSASSSEKSGVIVVDVKGA
VKKEGVYELPAGSRVTDAIEKAGGFTDKANKKSVNLAQKLEDQAVVYVAAQGEDVEEVTGPGSSSGGISDSNRSSHAKVN
LNTASKEELQTISGIGEKRAQDIIDYREEHGGFKSVEELKNISGIGDKTYEKIAPEVTV

Nucleotide


Download         Length: 660 bp        

>NTDB_id=254081 DLJ52_RS02915 WP_002962411.1 561410..562069(+) (comEA/celA/cilE) [Streptococcus sobrinus strain NIDR 6715-15]
ATGATTGAAGACTGGATTGAAAAAATCAAAGAAAATAAGCTGGTGGTGGGACTAGTTTTAGCTATAGTGGTTCTTGCTGG
AGCCTTGTTCTTGAATCTAGCTAATGGAAATGGGAGATCAGCGAAAAGTCAGGCCAATTTTCCTTCAATGGCTAGTACGA
GCCAGACCAGTCAAGGCAGTACTTCGTCAGCCTCAAGCTCGGAAAAATCAGGAGTCATCGTCGTTGATGTCAAGGGAGCC
GTCAAAAAAGAGGGAGTTTATGAATTACCGGCAGGTAGTCGGGTGACGGATGCTATTGAGAAGGCTGGCGGTTTCACCGA
TAAGGCCAACAAAAAGTCGGTTAATTTGGCTCAAAAATTGGAAGACCAGGCAGTTGTTTACGTGGCTGCCCAAGGAGAGG
ATGTTGAGGAGGTAACAGGCCCTGGCTCATCGTCTGGGGGAATCAGTGATTCAAATCGTAGTAGCCATGCCAAGGTTAAT
CTCAATACTGCCAGTAAGGAAGAGCTGCAAACCATTTCAGGTATTGGTGAGAAGCGGGCTCAAGATATTATTGACTACCG
GGAGGAGCATGGCGGGTTCAAGTCTGTTGAGGAGCTGAAAAATATTTCTGGTATCGGTGACAAGACCTACGAAAAAATCG
CACCCGAGGTGACCGTATGA

Domains

Predicted by InterProScan.

SLBB domain (SLBB)

(74-128)

Helix-hairpin-helix motif (HHH_3)

(155-218)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.