Detailed information NTG0254082

Bioinformatically predicted

Overview

• Name: comEC/celB
• Type: Machinery gene
• Locus tag: DLJ52_RS02920
• Genome accession: NZ_CP029559
• Coordinates: 562066..564297 (+)
• Length: 743 a.a.
• NCBI ID: WP_019772311.1
• Uniprot ID: -
• Organism: Streptococcus sobrinus strain NIDR 6715-15
• Function: ssDNA transport into the cell (predicted from homology) DNA binding and uptake

Genomic Context

Location: 557066..569297

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
DLJ52_RS02890 (DLJ52_02890)	-	557375..557797 (+)	423	WP_002962402.1	YtxH domain-containing protein	-
DLJ52_RS02895 (DLJ52_02895)	-	557996..558808 (+)	813	WP_019772312.1	DUF6612 family protein	-
DLJ52_RS02900 (DLJ52_02900)	-	559019..559318 (-)	300	WP_019770143.1	DUF3270 domain-containing protein	-
DLJ52_RS02905 (DLJ52_02905)	-	559520..560449 (+)	930	WP_002962408.1	peptidase U32 family protein	-
DLJ52_RS02910 (DLJ52_02910)	-	560459..561199 (+)	741	WP_019769805.1	1-acyl-sn-glycerol-3-phosphate acyltransferase	-
DLJ52_RS02915 (DLJ52_02915)	comEA/celA/cilE	561410..562069 (+)	660	WP_002962411.1	helix-hairpin-helix domain-containing protein	Machinery gene
DLJ52_RS02920 (DLJ52_02920)	comEC/celB	562066..564297 (+)	2232	WP_019772311.1	DNA internalization-related competence protein ComEC/Rec2	Machinery gene
DLJ52_RS02925 (DLJ52_02925)	-	564440..565441 (+)	1002	WP_109982470.1	DUF805 domain-containing protein	-
DLJ52_RS02930 (DLJ52_02930)	-	565452..566063 (+)	612	Protein_529	DUF805 domain-containing protein	-
DLJ52_RS02935 (DLJ52_02935)	-	566141..566536 (+)	396	WP_019776826.1	TM2 domain-containing protein	-
DLJ52_RS02940 (DLJ52_02940)	holA	567193..568239 (+)	1047	WP_019769359.1	DNA polymerase III subunit delta	-

Sequence

Protein

• Length: 743 a.a.
• Molecular weight: 84784.32 Da
• Isoelectric Point: 10.1145

>NTDB_id=254082 DLJ52_RS02920 WP_019772311.1 562066..564297(+) (comEC/celB) [Streptococcus sobrinus strain NIDR 6715-15]
MSKYFPIRPIYLAFLLVLLAYFIYSGYCLVGVLLAFTLCQLWRHYNLKKVGQVLLVLLSFGLAFWTYQYRVNQAYKSAPS
QVQELEMIPDTISTNGDQLSFRAKSQGRTYQVFYRLKSPEEKRFYQNVKDKLDLQVSAKVTQPQALRNFHGFNYRAYLKH
EGIYRLVTVDKIQGWIPAKRLTFFDRLHVLRRRALVTCQQKFPSPMNHYMTGLLFGYLDKDFDQMGDIYTSLGIIHLFAL
SGMQVDFFIGLYRKFLLRLGLRRDWVDILQVPFSVFYAGMTGYAPSVLRSLLQSFWGNLELKRLDNLAFSIFCMFLLRPN
FLLTTGGLLSFAYAFILAVLDFQNLSRVKAGLAQGASLSLGAFPLLAYLFGVFQPLSLVLTLAFSLVFDYLMLPFLTLAF
IVSPLIRLTWVNPLFSLLEQIVIWTHDIVGRPPVTGSPSLAILTLMLILLAFLHDYWQVKKIRPWLILLFVLLACLVKHP
LTNEVTMIDVGQGDSIFLRDSWGKTILIDTGGRVTFGQKEAWQKSNSDSNADKTVIPYLKSRGVGKIDQLVLTHTDTDHI
GDLEAVAKNFQIGQVLVSKGSLTRPAFVKRLKALKLKVRTVQVGDGLTIMGSRLHVLYPKSLGKGDNNDSLVLYGNLLNK
TFLFTGDQEKEGEEDLMKIYPNLHVQILKAGHHGSKGSSTPDFLKQISPEVALISAGQNNRYGHPNKETLERFKKQKMRV
YRTDQQGAISYRGFWDWHLETVR

Nucleotide

• Length: 2232 bp

>NTDB_id=254082 DLJ52_RS02920 WP_019772311.1 562066..564297(+) (comEC/celB) [Streptococcus sobrinus strain NIDR 6715-15]
ATGAGCAAATACTTTCCTATCAGGCCAATCTACTTGGCTTTTTTGCTGGTCTTGCTGGCTTATTTCATCTATTCAGGCTA
CTGCTTGGTCGGGGTCCTCTTGGCCTTCACTCTCTGTCAACTTTGGCGGCATTACAACTTAAAAAAAGTCGGCCAGGTTC
TGCTGGTTCTCTTGTCCTTTGGATTAGCCTTTTGGACCTATCAATATCGGGTCAATCAGGCTTATAAGTCTGCTCCCAGT
CAAGTACAGGAGCTGGAGATGATTCCAGATACTATCTCTACTAATGGTGACCAGCTCAGCTTTCGTGCTAAGAGTCAGGG
GCGGACTTATCAGGTTTTCTATCGCTTGAAATCACCTGAGGAAAAGCGATTCTATCAAAATGTAAAGGATAAACTTGACC
TGCAGGTTTCAGCCAAGGTAACTCAACCCCAGGCTCTGCGGAATTTTCATGGCTTTAACTATCGAGCCTATCTCAAGCAT
GAGGGTATTTATCGACTGGTGACTGTCGATAAAATTCAAGGCTGGATACCGGCCAAGCGACTGACCTTCTTTGACCGTCT
GCATGTCCTGAGACGGCGGGCTCTAGTAACTTGTCAACAGAAGTTTCCCAGTCCCATGAACCACTACATGACGGGGCTTC
TCTTTGGTTATCTGGATAAGGATTTTGACCAGATGGGCGATATTTATACCAGTCTGGGGATTATCCACCTTTTTGCCTTG
TCTGGTATGCAGGTTGATTTCTTTATCGGCCTTTATCGAAAATTCCTCTTACGACTTGGCCTGAGAAGGGATTGGGTGGA
TATTTTACAAGTGCCTTTTTCAGTTTTCTATGCTGGGATGACCGGTTATGCTCCCTCGGTTCTAAGAAGCCTGCTTCAGT
CTTTCTGGGGCAATCTGGAACTAAAGCGATTGGATAATCTGGCCTTTAGCATCTTTTGTATGTTTTTGCTGAGACCCAAC
TTCCTGCTGACCACTGGAGGCCTGCTTAGTTTTGCCTATGCCTTTATTTTGGCGGTGCTTGATTTCCAAAACTTGAGCAG
GGTTAAGGCAGGCCTAGCCCAGGGTGCCAGTTTGTCTTTGGGTGCCTTCCCTCTGCTGGCCTATTTATTTGGCGTTTTTC
AGCCTCTATCGCTTGTCTTGACCCTGGCCTTTTCCCTAGTTTTCGATTATCTGATGCTCCCCTTTTTGACTTTGGCCTTC
ATAGTCAGCCCGCTAATTAGACTGACCTGGGTCAATCCTCTCTTCAGCCTGCTGGAGCAAATTGTCATCTGGACTCATGA
TATTGTTGGCCGGCCTCCCGTTACTGGTAGTCCAAGTTTGGCTATTCTTACTCTCATGCTAATCTTATTAGCCTTTCTCC
ATGATTATTGGCAGGTCAAAAAGATTCGTCCTTGGCTAATTCTGCTCTTCGTTTTACTAGCCTGTTTGGTCAAACATCCT
TTGACCAATGAGGTGACCATGATTGATGTCGGTCAAGGAGATAGTATTTTCCTGCGCGATAGCTGGGGCAAGACTATTCT
AATTGATACTGGTGGACGGGTAACTTTTGGGCAGAAGGAGGCCTGGCAAAAGAGCAATTCAGATAGCAATGCGGACAAGA
CCGTCATTCCCTACCTTAAAAGTCGGGGTGTGGGGAAAATTGACCAGCTGGTTCTGACCCATACCGATACAGACCATATT
GGCGATTTGGAAGCTGTTGCCAAGAATTTTCAAATTGGCCAGGTACTGGTCAGCAAGGGTAGTCTGACAAGACCAGCTTT
TGTCAAGCGTCTCAAGGCTCTGAAGCTGAAGGTGAGGACAGTTCAAGTAGGCGATGGTTTAACAATTATGGGTAGTAGGC
TTCATGTCCTCTATCCCAAGAGTCTGGGCAAAGGTGACAATAATGATTCCTTAGTTCTCTATGGGAATCTGCTCAATAAG
ACTTTTCTCTTTACTGGCGATCAAGAAAAAGAAGGAGAGGAAGATCTGATGAAAATCTATCCCAATCTCCATGTCCAGAT
TCTCAAAGCCGGTCACCATGGTTCCAAAGGTTCGTCTACCCCAGATTTTCTCAAGCAAATCAGCCCAGAAGTCGCCCTTA
TTTCGGCGGGTCAAAATAATCGCTATGGTCACCCCAACAAGGAGACATTGGAGCGGTTTAAGAAACAGAAAATGAGAGTT
TACCGGACTGATCAACAAGGGGCAATTTCTTATCGTGGCTTCTGGGATTGGCACCTAGAAACGGTTCGGTAA

Domains

Predicted by InterProScan.

• Domain of unknown function (DUF4131) (DUF4131) (25-173)

• Metallo-beta-lactamase superfamily (Lactamase_B) (489-697)

• Competence protein (Competence) (213-459)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comEC/celB	Streptococcus mitis SK321	47.241	100	0.472
comEC/celB	Streptococcus mitis NCTC 12261	47.099	99.731	0.47
comEC/celB	Streptococcus pneumoniae TIGR4	46.631	99.865	0.466
comEC/celB	Streptococcus pneumoniae R6	46.361	99.865	0.463
comEC/celB	Streptococcus pneumoniae Rx1	46.361	99.865	0.463
comEC/celB	Streptococcus pneumoniae D39	46.361	99.865	0.463
comEC	Lactococcus lactis subsp. cremoris KW2	46.102	100	0.462