Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Machinery gene
Locus tag   CGZ65_RS11800 Genome accession   NZ_CP023429
Coordinates   2356922..2358163 (-) Length   413 a.a.
NCBI ID   WP_096295945.1    Uniprot ID   A0A3N4NUK3
Organism   Neisseria weixii strain 10022     
Function   assembly of type IV pilus (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 2351922..2363163
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  CGZ65_RS13040 - 2353038..2353379 (+) 342 WP_123803569.1 hypothetical protein -
  CGZ65_RS11775 (CGZ65_11775) lspA 2353675..2354174 (+) 500 Protein_2408 signal peptidase II -
  CGZ65_RS11780 (CGZ65_11780) ispH 2354199..2355167 (+) 969 WP_096295941.1 4-hydroxy-3-methylbut-2-enyl diphosphate reductase -
  CGZ65_RS11785 (CGZ65_11785) yacG 2355260..2355445 (-) 186 WP_096295942.1 DNA gyrase inhibitor YacG -
  CGZ65_RS11790 (CGZ65_11790) coaE 2355448..2356056 (-) 609 WP_096295943.1 dephospho-CoA kinase -
  CGZ65_RS11795 (CGZ65_11795) pilD 2356057..2356920 (-) 864 WP_096295944.1 prepilin peptidase Machinery gene
  CGZ65_RS11800 (CGZ65_11800) pilG 2356922..2358163 (-) 1242 WP_096295945.1 type II secretion system F family protein Machinery gene
  CGZ65_RS11805 (CGZ65_11805) pilF 2358238..2359917 (-) 1680 WP_096295946.1 type IV-A pilus assembly ATPase PilB Machinery gene
  CGZ65_RS11815 (CGZ65_11815) - 2360586..2361152 (+) 567 WP_096295947.1 hypothetical protein -
  CGZ65_RS11820 (CGZ65_11820) groL 2361472..2363105 (-) 1634 Protein_2416 chaperonin GroEL -

Sequence

Protein


Download         Length: 413 a.a.        Molecular weight: 45836.23 Da        Isoelectric Point: 10.0769

>NTDB_id=247033 CGZ65_RS11800 WP_096295945.1 2356922..2358163(-) (pilG) [Neisseria weixii strain 10022]
MAQEEQKKGLFAQKSKGKRFTFEGKNTNTDQVVRGEVVAKDEEEARKKLQRRGIRPLRISKVKAVRKRRITQEDITVFTR
QLATMMKAGLPLMQAFEIVARGHSNPSMTQMLMQIRADVEQGSALGKAFAKHPKYFDRFYCNLVAAGETGGVLEGLLDKL
AVYKEKTQAIKKKVKSALTYPISIVVVAVVLMFVMMMFVLPAFKEVYSGMGAELPWLTQVVMNISDFFVAYGWIMIIVLI
LMIFGLYKLRQKSPAFQKRVDAMLLKLPIFGSIVKKATIARWSRTTSTLFAAGVPLVEVLESVAGASGNILYEEATQDIR
AKVTQGLSLTSSMQTTEMFPNMVIQMAAIGEESGSLDDMLNKAAEFYEDEVDNAVAQLSSLMEPIIMVVLGSLIGILLVA
MYLPLFNLGNVVG

Nucleotide


Download         Length: 1242 bp        

>NTDB_id=247033 CGZ65_RS11800 WP_096295945.1 2356922..2358163(-) (pilG) [Neisseria weixii strain 10022]
ATGGCTCAAGAAGAGCAAAAAAAGGGCTTGTTCGCCCAAAAGAGCAAAGGTAAACGTTTTACATTTGAAGGTAAAAATAC
CAATACTGATCAAGTGGTTCGTGGTGAAGTGGTGGCGAAAGACGAAGAAGAAGCGCGTAAAAAGCTTCAGCGTCGCGGTA
TCCGCCCGTTGCGTATCAGTAAGGTGAAAGCAGTACGCAAGCGCCGCATTACGCAAGAAGACATCACCGTATTTACCCGT
CAATTGGCGACCATGATGAAAGCCGGTCTGCCTTTGATGCAGGCTTTTGAAATCGTGGCGCGTGGCCATTCTAATCCTTC
CATGACGCAGATGCTGATGCAAATCCGTGCCGATGTCGAGCAGGGGAGTGCATTAGGTAAAGCTTTTGCCAAACACCCTA
AATATTTCGACCGTTTCTACTGTAATTTGGTGGCGGCAGGCGAAACCGGCGGTGTATTGGAAGGCTTGTTGGATAAATTG
GCAGTATATAAAGAGAAAACGCAAGCCATTAAGAAAAAAGTCAAATCTGCACTTACCTATCCGATTTCGATTGTGGTGGT
GGCTGTGGTGTTGATGTTTGTGATGATGATGTTTGTACTGCCTGCCTTTAAAGAAGTATACAGCGGCATGGGCGCGGAAC
TGCCGTGGCTGACCCAAGTTGTGATGAATATTTCCGACTTTTTTGTCGCGTACGGTTGGATCATGATTATCGTCCTGATT
CTGATGATTTTCGGTCTTTACAAGCTGCGCCAAAAATCACCGGCTTTTCAAAAACGTGTTGATGCCATGTTGCTCAAGCT
GCCAATTTTCGGTTCGATTGTGAAAAAGGCCACGATTGCACGCTGGTCGCGCACCACTTCCACCTTGTTTGCCGCGGGTG
TGCCGCTGGTAGAAGTATTGGAGTCGGTGGCAGGTGCGTCCGGCAATATTCTTTACGAAGAAGCCACACAAGACATCCGT
GCCAAAGTCACACAAGGTTTGTCGCTGACTTCCAGTATGCAGACAACCGAAATGTTCCCCAATATGGTGATTCAGATGGC
CGCCATTGGTGAGGAATCAGGTTCTTTAGACGATATGTTGAACAAAGCGGCTGAGTTTTATGAAGACGAAGTCGACAATG
CCGTTGCCCAATTATCGTCATTGATGGAGCCGATTATCATGGTGGTGTTGGGTTCGTTAATCGGTATATTACTGGTGGCC
ATGTACCTGCCTTTGTTCAACTTGGGCAACGTGGTGGGCTAA

Domains

Predicted by InterproScan.

Type II secretion system (T2SS), protein F (T2SSF)

(78-201)

Type II secretion system (T2SS), protein F (T2SSF)

(282-404)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A3N4NUK3

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Neisseria gonorrhoeae MS11

72.457

97.579

0.707
  pilG Neisseria meningitidis 44/76-A

71.712

97.579

0.7
  pilC Legionella pneumophila strain ERS1305867

47.607

96.126

0.458
  pilC Acinetobacter baumannii D1279779

46.985

96.368

0.453
  pilC Acinetobacter baylyi ADP1

45.729

96.368

0.441
  pilC Pseudomonas stutzeri DSM 10701

44.335

98.305

0.436
  pilC Vibrio cholerae strain A1552

41.5

96.852

0.402
  pilC Vibrio campbellii strain DS40M4

37.5

96.852

0.363

Multiple sequence alignment