Detailed information NTG0247032

Bioinformatically predicted

Overview

• Name: pilD
• Type: Machinery gene
• Locus tag: CGZ65_RS11795
• Genome accession: NZ_CP023429
• Coordinates: 2356057..2356920 (-)
• Length: 287 a.a.
• NCBI ID: WP_096295944.1
• Uniprot ID: -
• Organism: Neisseria weixii strain 10022
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 2351057..2361920

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
CGZ65_RS14455 (CGZ65_11770)	-	2351618..2353051 (-)	1434	WP_232507452.1	transferrin-binding protein-like solute binding protein	-
CGZ65_RS13040	-	2353038..2353379 (+)	342	WP_123803569.1	hypothetical protein	-
CGZ65_RS11775 (CGZ65_11775)	lspA	2353675..2354174 (+)	500	Protein_2408	signal peptidase II	-
CGZ65_RS11780 (CGZ65_11780)	ispH	2354199..2355167 (+)	969	WP_096295941.1	4-hydroxy-3-methylbut-2-enyl diphosphate reductase	-
CGZ65_RS11785 (CGZ65_11785)	yacG	2355260..2355445 (-)	186	WP_096295942.1	DNA gyrase inhibitor YacG	-
CGZ65_RS11790 (CGZ65_11790)	coaE	2355448..2356056 (-)	609	WP_096295943.1	dephospho-CoA kinase	-
CGZ65_RS11795 (CGZ65_11795)	pilD	2356057..2356920 (-)	864	WP_096295944.1	prepilin peptidase	Machinery gene
CGZ65_RS11800 (CGZ65_11800)	pilG	2356922..2358163 (-)	1242	WP_096295945.1	type II secretion system F family protein	Machinery gene
CGZ65_RS11805 (CGZ65_11805)	pilF	2358238..2359917 (-)	1680	WP_096295946.1	type IV-A pilus assembly ATPase PilB	Machinery gene
CGZ65_RS11815 (CGZ65_11815)	-	2360586..2361152 (+)	567	WP_096295947.1	hypothetical protein	-

Sequence

Protein

• Length: 287 a.a.
• Molecular weight: 31648.83 Da
• Isoelectric Point: 8.2181

>NTDB_id=247032 CGZ65_RS11795 WP_096295944.1 2356057..2356920(-) (pilD) [Neisseria weixii strain 10022]
MLEIWNQLAPFVLPLTVIFGLLIGSFLNVVIYRVPVMMERGWTQFAKEHLNLPLTAEEEAPFTLSKPDSRCPKCHAPVKA
WQNIPIVSYLLLGGKCSSCKTPISIRYPLVELLTGVLFSVVAWQYGWSWLTFGGLIFTAMLIALTFIDYDTQYLPDSLTL
SLVWLGLLYNFNGAFTTLQSAVLGAVCGYMSLWLLCYVYKLLTGKIGMGGGDFKLLAALGAWLGVGVLPVLVFMAALIGI
IVALLSRVGKGQQFAFGPSLAVAGWVIFIASEPIHQLIQWWLMKSGF

Nucleotide

• Length: 864 bp

>NTDB_id=247032 CGZ65_RS11795 WP_096295944.1 2356057..2356920(-) (pilD) [Neisseria weixii strain 10022]
ATGTTGGAAATTTGGAATCAATTAGCACCATTTGTTCTACCTTTGACTGTGATTTTCGGTTTGTTGATCGGCAGTTTTTT
GAATGTGGTCATTTACCGCGTTCCGGTAATGATGGAGCGGGGCTGGACGCAATTTGCTAAAGAACATTTAAATTTGCCGC
TAACAGCCGAAGAAGAAGCACCGTTTACGTTGTCGAAACCGGATTCGCGCTGTCCGAAATGTCACGCACCGGTGAAGGCC
TGGCAGAATATTCCGATTGTCAGTTATTTGCTGTTGGGCGGTAAATGCAGTTCGTGCAAAACACCCATCAGTATCCGTTA
TCCCTTAGTGGAATTGCTCACGGGCGTTTTATTCAGTGTGGTAGCGTGGCAATACGGCTGGTCGTGGTTGACGTTTGGCG
GCTTGATTTTCACCGCTATGCTGATTGCACTGACCTTTATCGACTACGATACCCAATATCTGCCCGATTCTCTGACCTTG
TCGCTGGTGTGGTTGGGCTTGCTGTATAACTTCAACGGCGCATTTACCACGCTGCAATCAGCGGTGCTGGGCGCGGTTTG
CGGTTATATGAGTTTGTGGCTGCTGTGTTATGTCTATAAACTCTTAACCGGCAAAATCGGCATGGGTGGCGGCGACTTTA
AATTATTGGCTGCACTGGGTGCATGGCTGGGTGTCGGGGTGTTGCCGGTATTGGTGTTTATGGCGGCCTTAATCGGCATT
ATCGTCGCGCTTTTATCACGTGTCGGCAAAGGGCAGCAATTTGCGTTCGGCCCAAGCTTGGCGGTGGCAGGATGGGTTAT
TTTCATTGCCAGTGAACCGATTCACCAATTGATTCAATGGTGGCTAATGAAATCAGGATTTTAA

Domains

Predicted by InterproScan.

• Type IV leader peptidase family (Peptidase_A24) (136-244)

• Bacterial Peptidase A24 N-terminal domain (A24_N_bact) (18-125)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilD	Neisseria gonorrhoeae MS11	70.909	95.819	0.679
pilD	Acinetobacter nosocomialis M2	47.842	96.864	0.463
pilD	Acinetobacter baumannii D1279779	47.122	96.864	0.456
pilD	Vibrio cholerae strain A1552	46.043	96.864	0.446
pilD	Vibrio campbellii strain DS40M4	45.421	95.122	0.432