Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Machinery gene
Locus tag   BG910_RS07490 Genome accession   NZ_CP022278
Coordinates   1518927..1520168 (+) Length   413 a.a.
NCBI ID   WP_089036303.1    Uniprot ID   A0A220S2D4
Organism   Neisseria chenwenguii strain 10023     
Function   assembly of type IV pilus (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 1513927..1525168
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  BG910_RS07465 (BG910_07455) - 1513970..1514260 (+) 291 WP_089036298.1 YciI family protein -
  BG910_RS07470 (BG910_07460) - 1514260..1514529 (+) 270 WP_089036299.1 BolA family transcriptional regulator -
  BG910_RS07475 (BG910_07465) - 1514551..1515423 (+) 873 WP_089036300.1 peptidylprolyl isomerase -
  BG910_RS07480 (BG910_07470) rfaQ 1515595..1516665 (-) 1071 WP_089036301.1 putative lipopolysaccharide heptosyltransferase III -
  BG910_RS07485 (BG910_07475) pilF 1517177..1518856 (+) 1680 WP_089036302.1 type IV-A pilus assembly ATPase PilB Machinery gene
  BG910_RS07490 (BG910_07480) pilG 1518927..1520168 (+) 1242 WP_089036303.1 type II secretion system F family protein Machinery gene
  BG910_RS07495 (BG910_07485) pilD 1520170..1521033 (+) 864 WP_089036304.1 A24 family peptidase Machinery gene
  BG910_RS07500 (BG910_07490) coaE 1521035..1521649 (+) 615 WP_089036305.1 dephospho-CoA kinase -
  BG910_RS07505 (BG910_07495) yacG 1521663..1521848 (+) 186 WP_089036306.1 DNA gyrase inhibitor YacG -
  BG910_RS12565 - 1522133..1523623 (+) 1491 WP_198344769.1 hypothetical protein -
  BG910_RS07520 (BG910_07510) - 1523653..1523985 (+) 333 WP_157694050.1 GtrA family protein -
  BG910_RS07525 (BG910_07515) - 1523993..1524931 (+) 939 WP_089036309.1 glycosyltransferase family 2 protein -

Sequence

Protein


Download         Length: 413 a.a.        Molecular weight: 45127.29 Da        Isoelectric Point: 9.8650

>NTDB_id=237854 BG910_RS07490 WP_089036303.1 1518927..1520168(+) (pilG) [Neisseria chenwenguii strain 10023]
MAQAGQKQGAFGSKSKGKRFTFEGKNTSTEQLVRGEVVAKDEEEARKKLQRRGIKPMRVTKVKAVRKKRITQEDITVFTR
QLATMMKAGLPLMQAFEIVARGHSNPSMTQMLMQVRADVEQGSALGISFAKYPKYFDRFYCNLVSAGEAGGVLEGLLDKL
AIYKEKTQAIKKKVKTALTYPIAIVVVAVVLMFVMMMFVLPAFKEVYEGMGAELPGLTQIVMNLSDLFVAYGWMMIVGII
IVGFGLFKLHEKSPVFQKKVDAALLKMPIFGGIVRKATIARWARTTSTLFAAGVPLVEALDSVAGAAGNILYEEATQDIR
AKVAQGLSLTSSMQSTDLFPNMVLQMAAIGEESGSLDDMLNKAAEFYEDEVDNAVAQLSSMMEPIIMVVLGSLIGTLLVA
MYLPLFNLGNVVG

Nucleotide


Download         Length: 1242 bp        

>NTDB_id=237854 BG910_RS07490 WP_089036303.1 1518927..1520168(+) (pilG) [Neisseria chenwenguii strain 10023]
ATGGCTCAAGCAGGGCAAAAACAAGGGGCGTTCGGCTCGAAAAGTAAAGGCAAACGCTTTACCTTTGAGGGTAAAAATAC
CAGTACCGAACAATTGGTGCGCGGCGAGGTCGTCGCCAAAGATGAAGAAGAAGCGCGTAAAAAACTCCAGCGCCGCGGCA
TCAAGCCGATGCGCGTGACCAAAGTCAAAGCAGTCCGCAAGAAACGGATTACCCAAGAAGACATTACCGTCTTTACCCGC
CAGCTGGCAACCATGATGAAAGCAGGGCTGCCGCTGATGCAGGCGTTTGAAATCGTCGCGCGCGGCCATTCCAACCCTTC
GATGACGCAGATGCTGATGCAGGTGCGCGCCGATGTGGAACAGGGTAGTGCGCTGGGTATTTCGTTTGCCAAATATCCCA
AATATTTCGACCGTTTCTATTGCAACTTGGTCTCTGCCGGCGAGGCCGGTGGTGTTTTGGAGGGATTGCTCGATAAGCTC
GCGATTTATAAAGAAAAAACGCAAGCTATTAAGAAAAAAGTGAAAACGGCATTGACCTATCCTATTGCCATTGTGGTGGT
TGCGGTGGTTTTGATGTTTGTGATGATGATGTTTGTTTTGCCGGCATTTAAAGAAGTGTACGAGGGTATGGGCGCAGAAT
TGCCGGGACTGACCCAAATCGTGATGAACCTTTCCGATTTGTTTGTCGCGTATGGCTGGATGATGATTGTCGGCATCATT
ATTGTCGGATTCGGTTTGTTTAAACTGCATGAGAAATCACCGGTGTTTCAGAAAAAAGTAGATGCCGCTTTGCTGAAAAT
GCCGATTTTCGGCGGGATTGTACGCAAAGCGACGATTGCCCGCTGGGCGCGTACCACCTCGACCCTGTTTGCCGCGGGCG
TGCCGTTGGTTGAGGCATTGGATTCCGTTGCAGGCGCAGCAGGTAATATTCTTTACGAAGAAGCAACCCAAGACATCCGC
GCTAAAGTGGCGCAGGGTTTGTCGCTGACTTCCAGCATGCAGAGTACCGATTTATTCCCGAATATGGTTCTTCAGATGGC
CGCGATTGGCGAGGAATCAGGCTCTTTGGACGATATGCTGAACAAAGCCGCCGAGTTTTACGAAGACGAAGTTGATAACG
CCGTGGCGCAGCTTTCTTCAATGATGGAGCCGATTATTATGGTGGTGTTGGGTTCTCTAATCGGTACATTGTTGGTCGCC
ATGTATCTGCCGCTGTTCAACCTAGGTAATGTAGTAGGCTGA

Domains

Predicted by InterproScan.

Type II secretion system (T2SS), protein F (T2SSF)

(282-404)

Type II secretion system (T2SS), protein F (T2SSF)

(78-201)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A220S2D4

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Neisseria gonorrhoeae MS11

70.516

98.547

0.695
  pilG Neisseria meningitidis 44/76-A

69.779

98.547

0.688
  pilC Legionella pneumophila strain ERS1305867

48.492

96.368

0.467
  pilC Pseudomonas stutzeri DSM 10701

46.135

97.094

0.448
  pilC Acinetobacter baumannii D1279779

46.482

96.368

0.448
  pilC Acinetobacter baylyi ADP1

45

96.852

0.436
  pilC Vibrio cholerae strain A1552

40

96.852

0.387
  pilC Vibrio campbellii strain DS40M4

37.811

97.337

0.368

Multiple sequence alignment