Detailed information
Bioinformatically predicted
Overview
| Name | comEA | Type | Machinery gene |
| Locus tag | CAY59_RS12645 | Genome accession | NZ_CP021145 |
| Coordinates | 2658720..2659007 (-) | Length | 95 a.a. |
| NCBI ID | WP_005425566.1 | Uniprot ID | A0A812FIP9 |
| Organism | Vibrio campbellii strain LA16-V1 | ||
| Function | dsDNA binding (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 2653720..2664007
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| CAY59_RS12620 (CAY59_12475) | - | 2654156..2655370 (+) | 1215 | WP_029788618.1 | pyridoxal phosphate-dependent aminotransferase | - |
| CAY59_RS12625 (CAY59_12480) | yfbR | 2655454..2656038 (+) | 585 | WP_005425568.1 | 5'-deoxynucleotidase | - |
| CAY59_RS12630 (CAY59_12485) | - | 2656042..2657376 (+) | 1335 | WP_172840961.1 | anti-phage deoxyguanosine triphosphatase | - |
| CAY59_RS12635 (CAY59_12490) | - | 2657397..2658014 (-) | 618 | WP_045370542.1 | DTW domain-containing protein | - |
| CAY59_RS12640 (CAY59_12495) | rrtA | 2658018..2658569 (+) | 552 | WP_005425567.1 | rhombosortase | - |
| CAY59_RS12645 (CAY59_12500) | comEA | 2658720..2659007 (-) | 288 | WP_005425566.1 | helix-hairpin-helix domain-containing protein | Machinery gene |
| CAY59_RS12650 (CAY59_12505) | ppiD | 2659153..2661012 (-) | 1860 | WP_038890556.1 | peptidylprolyl isomerase | - |
| CAY59_RS12655 (CAY59_12510) | - | 2661227..2661499 (-) | 273 | WP_005430934.1 | HU family DNA-binding protein | - |
Sequence
Protein
Download Length: 95 a.a. Molecular weight: 10534.24 Da Isoelectric Point: 5.8692
>NTDB_id=228576 CAY59_RS12645 WP_005425566.1 2658720..2659007(-) (comEA) [Vibrio campbellii strain LA16-V1]
MKWMLTLCLLILAPMSWAETKTKADKYEGIEITVNVNSATAEEIATLLNGIGEKKAQDIVEYRNEHGPFKTAADLTKVKG
IGEATVKKNEDRILL
MKWMLTLCLLILAPMSWAETKTKADKYEGIEITVNVNSATAEEIATLLNGIGEKKAQDIVEYRNEHGPFKTAADLTKVKG
IGEATVKKNEDRILL
Nucleotide
Download Length: 288 bp
>NTDB_id=228576 CAY59_RS12645 WP_005425566.1 2658720..2659007(-) (comEA) [Vibrio campbellii strain LA16-V1]
ATGAAATGGATGTTAACGCTGTGCTTATTGATACTCGCGCCGATGAGCTGGGCGGAAACAAAGACTAAAGCAGATAAGTA
TGAAGGTATTGAGATTACGGTTAACGTTAACTCTGCCACTGCAGAAGAGATTGCGACGCTACTTAATGGTATTGGTGAGA
AGAAAGCGCAAGATATTGTTGAGTATCGCAACGAGCACGGTCCATTTAAAACAGCTGCGGATCTTACAAAGGTGAAAGGC
ATCGGTGAGGCGACTGTTAAGAAGAACGAAGACCGCATCTTGCTGTAA
ATGAAATGGATGTTAACGCTGTGCTTATTGATACTCGCGCCGATGAGCTGGGCGGAAACAAAGACTAAAGCAGATAAGTA
TGAAGGTATTGAGATTACGGTTAACGTTAACTCTGCCACTGCAGAAGAGATTGCGACGCTACTTAATGGTATTGGTGAGA
AGAAAGCGCAAGATATTGTTGAGTATCGCAACGAGCACGGTCCATTTAAAACAGCTGCGGATCTTACAAAGGTGAAAGGC
ATCGGTGAGGCGACTGTTAAGAAGAACGAAGACCGCATCTTGCTGTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comEA | Vibrio campbellii strain DS40M4 |
96.842 |
100 |
0.968 |
| comEA | Vibrio parahaemolyticus RIMD 2210633 |
80 |
100 |
0.8 |
| comEA | Vibrio cholerae C6706 |
58.333 |
100 |
0.589 |
| comEA | Vibrio cholerae strain A1552 |
58.333 |
100 |
0.589 |
| comE1/comEA | Haemophilus influenzae Rd KW20 |
39.286 |
100 |
0.463 |
| comE | Neisseria gonorrhoeae MS11 |
39.785 |
97.895 |
0.389 |
| comE | Neisseria gonorrhoeae MS11 |
39.785 |
97.895 |
0.389 |
| comE | Neisseria gonorrhoeae MS11 |
39.785 |
97.895 |
0.389 |
| comE | Neisseria gonorrhoeae MS11 |
39.785 |
97.895 |
0.389 |
| comEA | Acinetobacter baylyi ADP1 |
48.649 |
77.895 |
0.379 |
| comEA/comE1 | Glaesserella parasuis strain SC1401 |
56.452 |
65.263 |
0.368 |