Detailed information    

insolico Bioinformatically predicted

Overview

Name   cinA   Type   Machinery gene
Locus tag   A6J31_RS09770 Genome accession   NZ_CP020431
Coordinates   1891227..1892495 (+) Length   422 a.a.
NCBI ID   WP_080611071.1    Uniprot ID   A0A1V0GFM6
Organism   Streptococcus sp. FDAARGOS_192     
Function   facilitate localization of RecA (predicted from homology)   
Homologous recombination

Genomic Context

Location: 1886227..1897495
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  A6J31_RS09740 (A6J31_09680) - 1886553..1886990 (-) 438 WP_002886318.1 LytTR family DNA-binding domain-containing protein -
  A6J31_RS09745 (A6J31_09685) - 1887169..1887474 (+) 306 WP_064524956.1 hypothetical protein -
  A6J31_RS09750 (A6J31_09690) mutL 1887524..1889467 (+) 1944 WP_022495805.1 DNA mismatch repair endonuclease MutL -
  A6J31_RS09755 (A6J31_09695) - 1889598..1889819 (+) 222 WP_080611067.1 hypothetical protein -
  A6J31_RS09760 (A6J31_09700) ruvA 1889977..1890567 (+) 591 WP_004181981.1 Holliday junction branch migration protein RuvA -
  A6J31_RS09765 (A6J31_09705) - 1890576..1891130 (+) 555 WP_080611069.1 DNA-3-methyladenine glycosylase I -
  A6J31_RS09770 (A6J31_09710) cinA 1891227..1892495 (+) 1269 WP_080611071.1 competence/damage-inducible protein A Machinery gene
  A6J31_RS09775 (A6J31_09715) recA 1892531..1893670 (+) 1140 WP_002886327.1 recombinase RecA Machinery gene
  A6J31_RS09780 (A6J31_09720) spx 1893837..1894235 (+) 399 WP_002886328.1 transcriptional regulator Spx -

Sequence

Protein


Download         Length: 422 a.a.        Molecular weight: 45808.98 Da        Isoelectric Point: 4.9880

>NTDB_id=222904 A6J31_RS09770 WP_080611071.1 1891227..1892495(+) (cinA) [Streptococcus sp. FDAARGOS_192]
MKAELIAVGTEILTGQITNTNAQFLSEKLAELGIDVYFHTAVGDNENRLLSVLDQASQRSDLVILCGGLGPTEDDLTKQT
LAKFLGKELVFDEEASKKLDSFFATRPKHTRTPNNERQAQIVEGAIPLQNPTGLAVGGIITAQGVTYVVLPGPPSELKPM
VNQELIPALTENHSSLYSRVLRFFGVGESQLVTILKDFIVNQTDPTIAPYAKVGEVTLRLSTKASSQEEADQKLDVLEKQ
IRSTKTLDGKSLSDFIYGYGESNSLAFEAFRLLKHYGKTITAAESLTAGLFQASIADFSGASQVFKGGFVTYSIEEKAKM
LDIPLSQLEEHGVVSHFTAEKMAEGARDKTDSDYGIALTGVAGPDSLEGHPAGTVFIGIADRNQVRSIKVVIGGRSRSDV
RYISTLYAFNLVRQALLQEDMI

Nucleotide


Download         Length: 1269 bp        

>NTDB_id=222904 A6J31_RS09770 WP_080611071.1 1891227..1892495(+) (cinA) [Streptococcus sp. FDAARGOS_192]
ATGAAAGCTGAATTGATTGCAGTAGGAACTGAAATCCTAACCGGGCAAATCACCAATACCAATGCCCAATTTTTATCTGA
GAAACTAGCTGAACTAGGAATTGACGTGTATTTTCACACAGCAGTAGGAGACAATGAAAATCGCCTACTTTCAGTTCTTG
ATCAGGCTAGTCAACGTAGTGATTTAGTCATACTTTGTGGTGGACTTGGCCCTACTGAGGACGACCTAACCAAGCAAACA
CTGGCTAAATTTTTAGGAAAAGAACTCGTTTTTGATGAGGAGGCTAGTAAAAAACTGGATAGTTTCTTTGCTACTCGTCC
TAAACACACACGAACGCCTAATAATGAACGTCAAGCACAAATTGTTGAGGGAGCTATTCCCTTGCAAAACCCGACAGGTC
TTGCAGTTGGAGGGATTATTACTGCTCAAGGGGTGACCTATGTAGTCTTACCTGGTCCACCAAGTGAACTCAAACCTATG
GTGAATCAAGAACTTATTCCAGCTCTTACTGAGAATCACTCAAGTCTTTATTCGAGAGTCCTAAGATTCTTCGGCGTTGG
AGAAAGTCAATTAGTGACTATTCTGAAGGATTTTATTGTTAACCAAACAGATCCAACCATAGCTCCATATGCTAAAGTGG
GGGAAGTAACACTTCGCTTGTCAACGAAGGCTTCTTCGCAAGAAGAAGCAGATCAAAAACTAGATGTTTTAGAAAAACAA
ATTCGTTCGACTAAAACTCTAGATGGCAAATCCTTATCTGATTTCATTTATGGATATGGAGAGTCTAATAGTTTAGCCTT
TGAAGCTTTTCGTTTGCTTAAGCACTATGGCAAGACCATCACTGCAGCTGAAAGCCTAACAGCAGGTTTATTTCAGGCTA
GTATTGCTGATTTTTCAGGGGCCTCACAAGTATTTAAAGGTGGATTTGTTACTTATAGCATTGAAGAAAAAGCTAAAATG
TTGGATATTCCCTTGTCGCAACTAGAAGAACATGGTGTTGTCAGTCATTTTACTGCAGAAAAAATGGCTGAAGGTGCTCG
AGATAAAACAGATAGCGATTATGGAATTGCACTTACCGGTGTAGCTGGACCAGATTCATTAGAAGGACACCCAGCAGGTA
CGGTATTTATTGGTATTGCTGATAGGAATCAAGTAAGGTCAATCAAGGTTGTTATAGGTGGAAGAAGTCGTTCTGATGTT
AGATATATTAGTACCCTCTATGCCTTTAACCTAGTTCGCCAAGCTTTATTACAAGAAGACATGATTTAA

Domains

Predicted by InterproScan.

Competence-damaged protein (CinA)

(264-415)

Damage-inducible protein CinA KH domain (CinA_KH)

(178-243)

Probable molybdopterin binding domain (MoCF_biosynth)

(5-170)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A1V0GFM6

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  cinA Streptococcus mitis SK321

75.656

99.289

0.751
  cinA Streptococcus mitis NCTC 12261

74.94

99.289

0.744
  cinA Streptococcus pneumoniae TIGR4

74.224

99.289

0.737
  cinA Streptococcus pneumoniae Rx1

73.986

99.289

0.735
  cinA Streptococcus pneumoniae R6

73.986

99.289

0.735
  cinA Streptococcus pneumoniae D39

73.747

99.289

0.732
  cinA Streptococcus mutans UA159

71.942

98.815

0.711
  cinA Streptococcus suis isolate S10

55.288

98.578

0.545
  cinA Bacillus subtilis subsp. subtilis str. 168

45.131

99.763

0.45

Multiple sequence alignment