Detailed information NTG0222714

Bioinformatically predicted

Overview

• Name: rarA
• Type: Machinery gene
• Locus tag: C2H95_RS16960
• Genome accession: NZ_CP026037
• Coordinates: 3272585..3273850 (+)
• Length: 421 a.a.
• NCBI ID: WP_014480427.1
• Uniprot ID: -
• Organism: Bacillus subtilis strain PK5_17
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 3267585..3278850

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
C2H95_RS16940 (C2H95_16850)	yrrB	3268956..3269576 (-)	621	WP_166444025.1	tetratricopeptide repeat protein	-
C2H95_RS16945 (C2H95_16855)	mnmA	3269662..3270777 (-)	1116	WP_014480424.1	tRNA 2-thiouridine(34) synthase MnmA	-
C2H95_RS16950 (C2H95_16860)	iscSA	3270808..3271947 (-)	1140	WP_072175599.1	cysteine desulfurase family protein	-
C2H95_RS16955 (C2H95_16865)	cymR	3271966..3272382 (-)	417	WP_003225879.1	cysteine metabolism transcriptional regulator CymR	-
C2H95_RS16960 (C2H95_16870)	rarA	3272585..3273850 (+)	1266	WP_014480427.1	replication-associated recombination protein A	Machinery gene
C2H95_RS16965 (C2H95_16875)	tcdA	3273890..3274654 (-)	765	WP_014480428.1	tRNA threonylcarbamoyladenosine dehydratase	-
C2H95_RS16975 (C2H95_16885)	aspS	3274989..3276767 (-)	1779	WP_015714438.1	aspartate--tRNA ligase	-
C2H95_RS16980 (C2H95_16890)	hisS	3276781..3278055 (-)	1275	WP_038829644.1	histidine--tRNA ligase	-
C2H95_RS16985 (C2H95_16895)	yrzK	3278437..3278607 (-)	171	WP_004399157.1	YrzK family protein	-

Sequence

Protein

• Length: 421 a.a.
• Molecular weight: 46463.29 Da
• Isoelectric Point: 7.2043

>NTDB_id=222714 C2H95_RS16960 WP_014480427.1 3272585..3273850(+) (rarA) [Bacillus subtilis strain PK5_17]
MKPLAYRMRPTKIEDIIGQQHLVAEDKIIGRMVQAKHLSSMILYGPPGIGKTSIATAIAGSTSIAFRKLNAVINNKKDME
IVAQEAKMSGQVILILDEVHRLDKGKQDFLLPYLENGMIILIGATTANPYHAINPAIRSRTQIFELEPLTPDLIKQALER
ALHDEHRGLGTYSVSIDDQAMEHFAHGCGGDVRSALNALELAVLSTKESADGEIHITLETAEECLQKKSFSHDKDGDAHY
DVLSAFQKSIRGSDANAALHYLARLIEAGDLESIARRLLVIAYEDIGLASPQAGPRVLNAIQTAERVGFPEARIPLANAV
IELCLSPKSNSAILAIDEALADIRAGKIGDVPKHLKDAHYKGAQELGRGIDYKYPHNYDSGWVEQQYLPDSLKNKQYYKP
KQTGKFESALKQVYDKLMKRK

Nucleotide

• Length: 1266 bp

>NTDB_id=222714 C2H95_RS16960 WP_014480427.1 3272585..3273850(+) (rarA) [Bacillus subtilis strain PK5_17]
ATGAAGCCATTGGCATATCGGATGCGTCCGACAAAAATAGAGGATATTATCGGCCAGCAGCATCTGGTGGCTGAAGATAA
AATTATTGGCAGAATGGTCCAGGCAAAACATTTGTCATCCATGATTTTGTACGGGCCGCCCGGAATTGGAAAAACATCAA
TCGCAACAGCAATCGCCGGTTCAACAAGTATTGCTTTTCGAAAGCTGAATGCTGTCATTAACAATAAAAAAGATATGGAA
ATCGTAGCTCAGGAAGCCAAGATGTCCGGCCAAGTGATTTTGATTCTGGATGAAGTCCACAGACTGGATAAAGGAAAACA
GGATTTTCTATTACCCTATTTAGAAAACGGGATGATTATTTTGATCGGAGCAACGACGGCTAACCCGTATCATGCCATTA
ATCCGGCGATCAGAAGCCGGACCCAGATTTTTGAGCTTGAACCGTTAACACCTGATCTGATTAAACAGGCACTGGAACGC
GCGCTCCATGATGAGCATCGGGGCCTTGGCACCTATTCTGTATCCATTGATGATCAGGCGATGGAGCATTTTGCCCACGG
ATGCGGAGGAGATGTCCGCTCCGCTTTAAATGCGCTTGAGCTTGCCGTGTTGTCAACGAAGGAGTCAGCAGACGGTGAAA
TTCACATTACATTAGAAACCGCGGAAGAATGCTTGCAGAAAAAAAGCTTTTCTCACGATAAAGATGGTGACGCGCATTAT
GATGTACTGTCCGCTTTTCAAAAATCGATCCGCGGCTCTGATGCCAACGCTGCTCTTCACTATTTGGCTAGATTAATTGA
AGCCGGTGATCTGGAGAGCATCGCAAGACGATTGCTTGTTATCGCCTATGAAGATATCGGTTTAGCAAGCCCGCAAGCCG
GCCCTAGAGTGCTGAACGCTATTCAGACCGCTGAGCGAGTCGGGTTTCCTGAAGCGCGAATCCCGCTGGCCAACGCAGTT
ATTGAGCTTTGCCTCTCACCGAAATCAAACTCTGCCATTCTGGCAATCGATGAGGCCCTGGCAGATATCAGAGCCGGAAA
AATTGGTGATGTCCCGAAGCATTTAAAAGACGCGCATTATAAAGGAGCTCAGGAATTAGGAAGAGGAATCGACTATAAAT
ACCCGCACAATTACGACAGCGGTTGGGTCGAACAACAATACCTCCCTGATTCTCTGAAAAATAAGCAATACTATAAGCCG
AAACAGACAGGAAAATTCGAATCCGCCTTAAAGCAGGTGTATGATAAATTAATGAAAAGAAAATAA

Domains

Predicted by InterProScan.

• AAA C-terminal domain (AAA_assoc_2) (172-251)

• MgsA AAA+ ATPase C terminal (MgsA_C) (252-417)

• Holliday junction DNA helicase RuvB P-loop domain (RuvB_N) (8-125)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rarA	Bacillus subtilis subsp. subtilis str. 168	99.287	100	0.993