Detailed information
Bioinformatically predicted
Overview
| Name | pilE | Type | Machinery gene |
| Locus tag | A6J50_RS05325 | Genome accession | NZ_CP020422 |
| Coordinates | 902787..903086 (+) | Length | 99 a.a. |
| NCBI ID | WP_014581678.1 | Uniprot ID | - |
| Organism | Neisseria meningitidis strain FDAARGOS_211 | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 897787..908086
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| A6J50_RS05265 (A6J50_05180) | - | 897807..897938 (+) | 132 | Protein_871 | DUF2061 domain-containing protein | - |
| A6J50_RS15360 | - | 898092..898178 (+) | 87 | Protein_872 | DUF2061 domain-containing protein | - |
| A6J50_RS05275 (A6J50_05190) | - | 898256..898585 (+) | 330 | WP_014581682.1 | FKBP-type peptidyl-prolyl cis-trans isomerase | - |
| A6J50_RS05280 (A6J50_05195) | - | 898614..898865 (+) | 252 | Protein_874 | pilin | - |
| A6J50_RS05290 (A6J50_05200) | - | 898996..899394 (+) | 399 | Protein_875 | pilin | - |
| A6J50_RS14635 | - | 900104..900229 (+) | 126 | Protein_876 | pilin | - |
| A6J50_RS05305 (A6J50_05220) | - | 900365..901372 (-) | 1008 | WP_080541925.1 | IS5 family transposase | - |
| A6J50_RS15365 (A6J50_05225) | - | 901325..901723 (+) | 399 | WP_079888326.1 | pilin | - |
| A6J50_RS05315 (A6J50_05230) | - | 901716..902062 (+) | 347 | Protein_879 | pilin | - |
| A6J50_RS05320 (A6J50_05235) | - | 902193..902591 (+) | 399 | Protein_880 | pilin | - |
| A6J50_RS05325 (A6J50_05240) | pilE | 902787..903086 (+) | 300 | WP_014581678.1 | pilin | Machinery gene |
| A6J50_RS05335 (A6J50_05250) | - | 903405..903797 (+) | 393 | Protein_882 | pilin | - |
| A6J50_RS05345 (A6J50_05255) | - | 904072..904473 (+) | 402 | Protein_883 | pilin | - |
| A6J50_RS05355 (A6J50_05265) | - | 904912..905337 (+) | 426 | Protein_884 | pilin | - |
| A6J50_RS05365 (A6J50_05270) | - | 905444..905836 (+) | 393 | Protein_885 | pilin | - |
| A6J50_RS14640 | - | 905997..906365 (+) | 369 | Protein_886 | pilin | - |
| A6J50_RS05385 (A6J50_05285) | pilE | 906831..907202 (+) | 372 | WP_264284714.1 | pilin | Machinery gene |
| A6J50_RS15480 | pilE | 907172..907333 (+) | 162 | WP_264284715.1 | pilin | Machinery gene |
Sequence
Protein
Download Length: 99 a.a. Molecular weight: 10566.93 Da Isoelectric Point: 10.3849
>NTDB_id=222713 A6J50_RS05325 WP_014581678.1 902787..903086(+) (pilE) [Neisseria meningitidis strain FDAARGOS_211]
MTGFNDAAGVATSTDIKGKYVQSVEVKNGVVTATMASSNVNNEIKGKKLSLWAKRQNGSVKWFCGQPVTRANTATDADVT
AANGTDKKIDTKLEKPFSR
MTGFNDAAGVATSTDIKGKYVQSVEVKNGVVTATMASSNVNNEIKGKKLSLWAKRQNGSVKWFCGQPVTRANTATDADVT
AANGTDKKIDTKLEKPFSR
Nucleotide
Download Length: 300 bp
>NTDB_id=222713 A6J50_RS05325 WP_014581678.1 902787..903086(+) (pilE) [Neisseria meningitidis strain FDAARGOS_211]
ATGACGGGATTCAATGATGCCGCCGGCGTGGCAACCTCCACCGACATTAAAGGCAAATATGTTCAAAGCGTTGAAGTCAA
AAACGGCGTCGTTACCGCCACAATGGCTTCAAGCAACGTAAACAACGAAATCAAAGGCAAAAAACTCTCCCTGTGGGCCA
AGCGTCAAAACGGTTCGGTAAAATGGTTCTGCGGACAGCCGGTTACGCGCGCCAACACCGCCACCGACGCCGACGTCACC
GCCGCCAACGGCACCGACAAGAAAATCGACACCAAACTAGAGAAACCGTTTTCCCGATAA
ATGACGGGATTCAATGATGCCGCCGGCGTGGCAACCTCCACCGACATTAAAGGCAAATATGTTCAAAGCGTTGAAGTCAA
AAACGGCGTCGTTACCGCCACAATGGCTTCAAGCAACGTAAACAACGAAATCAAAGGCAAAAAACTCTCCCTGTGGGCCA
AGCGTCAAAACGGTTCGGTAAAATGGTTCTGCGGACAGCCGGTTACGCGCGCCAACACCGCCACCGACGCCGACGTCACC
GCCGCCAACGGCACCGACAAGAAAATCGACACCAAACTAGAGAAACCGTTTTCCCGATAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilE | Neisseria gonorrhoeae MS11 |
74.157 |
89.899 |
0.667 |
| pilE | Neisseria gonorrhoeae strain FA1090 |
65.476 |
84.848 |
0.556 |