Detailed information NTG0220666

Bioinformatically predicted

Overview

• Name: pilE
• Type: Machinery gene
• Locus tag: BVH73_RS05120
• Genome accession: NZ_CP020046
• Coordinates: 1099025..1099465 (+)
• Length: 146 a.a.
• NCBI ID: WP_079416679.1
• Uniprot ID: -
• Organism: Thiomonas intermedia strain ATCC 15466
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1094025..1104465

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
BVH73_RS05105	-	1095656..1096423 (+)	768	WP_079416673.1	SPOR domain-containing protein	-
BVH73_RS05110	-	1096451..1097083 (+)	633	WP_079416675.1	Uma2 family endonuclease	-
BVH73_RS05115	-	1097438..1098649 (-)	1212	WP_079416677.1	M20 aminoacylase family protein	-
BVH73_RS05120	pilE	1099025..1099465 (+)	441	WP_079416679.1	pilin	Machinery gene
BVH73_RS05125	-	1099816..1100295 (+)	480	WP_179947960.1	pilin	-
BVH73_RS05135	-	1101089..1103488 (+)	2400	WP_079416681.1	hypothetical protein	-

Sequence

Protein

• Length: 146 a.a.
• Molecular weight: 15374.54 Da
• Isoelectric Point: 8.9470

>NTDB_id=220666 BVH73_RS05120 WP_079416679.1 1099025..1099465(+) (pilE) [Thiomonas intermedia strain ATCC 15466]
MRPTLQRGFTLIELMIVVAIIGILAAIAIPAYQNYTMRAQVAEGLTLAGGAKNAIWDYYAQHGAFPNSNQSAGLVSPASI
SGNYVSSVTVTSGLIQMTYGKNANSNLQNKVLYLSATSSAGTLIWNCTTHAAANGVSPDYLPTSCR

Nucleotide

• Length: 441 bp

>NTDB_id=220666 BVH73_RS05120 WP_079416679.1 1099025..1099465(+) (pilE) [Thiomonas intermedia strain ATCC 15466]
ATGCGCCCCACCCTCCAACGCGGCTTCACCCTCATCGAGCTGATGATCGTGGTGGCCATCATCGGCATCCTGGCGGCCAT
TGCCATTCCGGCCTATCAGAACTACACCATGCGCGCCCAGGTGGCCGAGGGGCTCACCCTGGCGGGTGGCGCGAAGAATG
CCATCTGGGATTACTACGCGCAGCACGGCGCCTTTCCCAACTCCAACCAGTCCGCCGGGCTGGTTTCGCCGGCGTCCATC
AGCGGCAATTATGTGAGCAGCGTCACCGTCACCTCGGGCCTCATTCAAATGACCTACGGCAAAAACGCCAACAGCAATCT
TCAGAACAAGGTGCTTTACCTCTCGGCCACCAGTTCGGCCGGCACCTTGATATGGAACTGCACCACCCATGCCGCCGCCA
ACGGCGTATCGCCAGACTATCTACCCACATCCTGCCGCTGA

Domains

Predicted by InterproScan.

• Pilin (bacterial filament) (Pilin) (38-146)

• Prokaryotic N-terminal methylation motif (N_methyl) (6-28)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilE	Neisseria gonorrhoeae strain FA1090	45.86	100	0.493
pilE	Neisseria gonorrhoeae MS11	45.223	100	0.486
pilA	Ralstonia pseudosolanacearum GMI1000	40.123	100	0.445
pilA2	Legionella pneumophila str. Paris	45.39	96.575	0.438
pilA2	Legionella pneumophila strain ERS1305867	45.39	96.575	0.438
pilA/pilA1	Eikenella corrodens VA1	40.127	100	0.432
comP	Acinetobacter baylyi ADP1	39.216	100	0.411
pilA	Vibrio campbellii strain DS40M4	37.584	100	0.384
pilA/pilAII	Pseudomonas stutzeri DSM 10701	36.242	100	0.37