Detailed information    

insolico Bioinformatically predicted

Overview


Name   comEA/celA/cilE   Type   Machinery gene
Locus tag   BWR56_RS03625 Genome accession   NZ_CP019562
Coordinates   751490..752140 (+) Length   216 a.a.
NCBI ID   WP_076984480.1    Uniprot ID   -
Organism   Streptococcus oralis strain S.MIT/ORALIS-351     
Function   dsDNA binding to the cell surface (predicted from homology)   
DNA binding and uptake

Genomic Context


Location: 746490..757140
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  BWR56_RS03590 (BWR56_0708) cvfB 746763..747617 (+) 855 WP_009730017.1 RNA-binding virulence regulatory protein CvfB -
  BWR56_RS03595 (BWR56_0709) - 747629..748234 (+) 606 WP_042902395.1 GrpB family protein -
  BWR56_RS03600 (BWR56_0710) - 748231..748446 (+) 216 WP_001232084.1 YozE family protein -
  BWR56_RS03605 (BWR56_0711) - 748527..749513 (+) 987 WP_076984477.1 PhoH family protein -
  BWR56_RS03610 (BWR56_0712) ald 749564..750676 (-) 1113 WP_076984478.1 alanine dehydrogenase -
  BWR56_RS03620 (BWR56_0713) - 750853..751422 (+) 570 WP_076984479.1 GNAT family N-acetyltransferase -
  BWR56_RS03625 (BWR56_0714) comEA/celA/cilE 751490..752140 (+) 651 WP_076984480.1 helix-hairpin-helix domain-containing protein Machinery gene
  BWR56_RS03630 (BWR56_0715) comEC/celB 752124..754364 (+) 2241 WP_076984481.1 DNA internalization-related competence protein ComEC/Rec2 Machinery gene
  BWR56_RS03635 (BWR56_0716) infC 754584..755114 (+) 531 WP_000848184.1 translation initiation factor IF-3 -
  BWR56_RS03640 (BWR56_0717) rpmI 755147..755347 (+) 201 WP_001125942.1 50S ribosomal protein L35 -
  BWR56_RS03645 (BWR56_0718) rplT 755399..755758 (+) 360 WP_000124830.1 50S ribosomal protein L20 -

Sequence


Protein


Download         Length: 216 a.a.        Molecular weight: 23210.47 Da        Isoelectric Point: 6.5116

>NTDB_id=216315 BWR56_RS03625 WP_076984480.1 751490..752140(+) (comEA/celA/cilE) [Streptococcus oralis strain S.MIT/ORALIS-351]
MEAIIEKIKEYKIIVICAILGLALGGFFLLKPTSQTPVKEKNLQAEVSAVSKDSSSEKEVKKEEKEESAEQDLITVDVKG
AVKSPGIYDLPVGSRVHDAVQKAGGLTEEADSKSLNLAQKVSDEALVYVPTKGEEAASQQAASGTTPSTSKEKKVNLNKA
SLEELKQVKGLGGKRAQDIIDHREANGKFKSVDELKKVSGIGAKTIEKLKDYVTVD

Nucleotide


Download         Length: 651 bp        

>NTDB_id=216315 BWR56_RS03625 WP_076984480.1 751490..752140(+) (comEA/celA/cilE) [Streptococcus oralis strain S.MIT/ORALIS-351]
ATGGAAGCAATTATCGAGAAAATCAAAGAGTATAAAATCATTGTCATTTGTGCTATTTTAGGTTTGGCCTTGGGCGGATT
TTTCCTACTAAAGCCAACTTCACAAACACCCGTCAAAGAAAAGAATTTGCAAGCTGAAGTCTCGGCCGTTTCAAAGGATT
CATCGTCTGAAAAGGAAGTCAAGAAGGAAGAAAAGGAAGAGTCTGCTGAACAAGATCTGATCACAGTGGATGTCAAAGGT
GCTGTTAAATCGCCAGGGATTTATGATTTACCAGTAGGGAGTCGTGTTCATGATGCTGTTCAGAAAGCTGGTGGATTGAC
AGAGGAAGCAGATAGTAAGTCGCTTAATCTCGCTCAGAAAGTCAGTGACGAGGCTCTTGTCTATGTTCCAACTAAGGGAG
AAGAAGCGGCTAGTCAGCAGGCTGCCTCTGGAACGACTCCTTCGACAAGTAAAGAAAAGAAGGTCAATCTCAATAAAGCT
AGTCTGGAAGAACTAAAGCAGGTCAAAGGCTTGGGAGGAAAACGAGCTCAGGATATTATCGACCATCGTGAGGCAAATGG
CAAATTCAAGTCGGTAGATGAATTAAAGAAGGTCTCTGGCATTGGCGCTAAGACCATAGAAAAGCTAAAAGATTATGTCA
CAGTGGATTAA

Domains


Predicted by InterproScan.

(76-126)

(151-214)


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comEA/celA/cilE Streptococcus mitis NCTC 12261

92.13

100

0.921

  comEA/celA/cilE Streptococcus pneumoniae TIGR4

91.204

100

0.912

  comEA/celA/cilE Streptococcus pneumoniae Rx1

89.352

100

0.894

  comEA/celA/cilE Streptococcus pneumoniae D39

89.352

100

0.894

  comEA/celA/cilE Streptococcus pneumoniae R6

89.352

100

0.894

  comEA/celA/cilE Streptococcus mitis SK321

87.5

100

0.875

  comEA Lactococcus lactis subsp. cremoris KW2

41.441

100

0.426

  comEA Streptococcus thermophilus LMD-9

39.524

97.222

0.384

  comEA Latilactobacillus sakei subsp. sakei 23K

33.906

100

0.366

  comEA Bacillus subtilis subsp. subtilis str. 168

39.109

93.519

0.366


Multiple sequence alignment