Detailed information NTG0191933

Bioinformatically predicted

Overview

• Name: comGC
• Type: Machinery gene
• Locus tag: BEK99_RS05520
• Genome accession: NZ_CP016760
• Coordinates: 1099333..1099659 (+)
• Length: 108 a.a.
• NCBI ID: WP_015900413.1
• Uniprot ID: -
• Organism: Staphylococcus carnosus strain LTH 3730 SK 13 JCM 6069
• Function: dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1094333..1104659

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
BEK99_RS05490 (BEK99_05490)	-	1095085..1095285 (+)	201	WP_015900419.1	YqgQ family protein	-
BEK99_RS05495 (BEK99_05495)	-	1095285..1096271 (+)	987	WP_015900418.1	ROK family glucokinase	-
BEK99_RS05500 (BEK99_05500)	-	1096271..1096600 (+)	330	WP_015900417.1	MTH1187 family thiamine-binding protein	-
BEK99_RS05505 (BEK99_05505)	-	1096600..1097223 (+)	624	WP_015900416.1	MBL fold metallo-hydrolase	-
BEK99_RS05510 (BEK99_05510)	comGA	1097294..1098286 (+)	993	WP_065865449.1	competence type IV pilus ATPase ComGA	Machinery gene
BEK99_RS13540	-	1098240..1098605 (+)	366	WP_237340565.1	hypothetical protein	-
BEK99_RS13545	comGB	1098956..1099315 (+)	360	WP_237340566.1	type II secretion system F family protein	Machinery gene
BEK99_RS05520 (BEK99_05520)	comGC	1099333..1099659 (+)	327	WP_015900413.1	competence type IV pilus major pilin ComGC	Machinery gene
BEK99_RS05525 (BEK99_05525)	comGD	1099637..1100092 (+)	456	WP_041612978.1	competence type IV pilus minor pilin ComGD	-
BEK99_RS05530 (BEK99_05530)	-	1100073..1100369 (+)	297	WP_041612977.1	hypothetical protein	-
BEK99_RS05535 (BEK99_05535)	comGF	1100326..1100784 (+)	459	WP_158297486.1	competence type IV pilus minor pilin ComGF	-
BEK99_RS05540 (BEK99_05540)	-	1100955..1101494 (+)	540	WP_046099279.1	shikimate kinase	-
BEK99_RS05545 (BEK99_05545)	gcvT	1101685..1102780 (+)	1096	Protein_1082	glycine cleavage system aminomethyltransferase GcvT	-
BEK99_RS05550 (BEK99_05550)	gcvPA	1102801..1104148 (+)	1348	Protein_1083	aminomethyl-transferring glycine dehydrogenase subunit GcvPA	-

Sequence

Protein

• Length: 108 a.a.
• Molecular weight: 12186.36 Da
• Isoelectric Point: 9.8933

>NTDB_id=191933 BEK99_RS05520 WP_015900413.1 1099333..1099659(+) (comGC) [Staphylococcus carnosus strain LTH 3730 SK 13 JCM 6069]
MKRYYFKLKNKNLKAFTLLEMLLVLLVISVLLILIIPNIAKQSEHVQATGCEAQQKMVNSQIEAYSLKNNRKPDSIDELV
TQGYLKEAQKKCKSGESITIKNGEASIS

Nucleotide

• Length: 327 bp

>NTDB_id=191933 BEK99_RS05520 WP_015900413.1 1099333..1099659(+) (comGC) [Staphylococcus carnosus strain LTH 3730 SK 13 JCM 6069]
ATGAAAAGATATTACTTTAAATTGAAAAATAAAAACTTAAAAGCTTTTACATTGTTAGAAATGCTGCTTGTATTATTGGT
TATTAGTGTATTATTAATTTTAATTATACCGAATATCGCTAAACAATCTGAACATGTCCAGGCTACAGGTTGTGAGGCAC
AACAAAAAATGGTGAATAGTCAAATAGAAGCTTATTCACTTAAAAATAATAGAAAACCTGATAGTATTGATGAACTTGTT
ACACAAGGATATTTAAAAGAAGCTCAAAAGAAGTGTAAATCAGGAGAAAGTATAACAATAAAAAATGGTGAAGCATCAAT
TAGCTAG

Domains

Predicted by InterproScan.

• Prokaryotic N-terminal methylation motif (N_methyl) (11-35)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comGC	Staphylococcus aureus MW2	72.632	87.963	0.639
comGC	Staphylococcus aureus N315	72.632	87.963	0.639
comGC/cglC	Streptococcus mitis SK321	45.283	98.148	0.444
comGC/cglC	Streptococcus pneumoniae R6	44.34	98.148	0.435
comGC/cglC	Streptococcus pneumoniae D39	44.34	98.148	0.435
comGC/cglC	Streptococcus pneumoniae TIGR4	44.34	98.148	0.435
comGC/cglC	Streptococcus pneumoniae Rx1	44.34	98.148	0.435
comGC/cglC	Streptococcus mitis NCTC 12261	47.826	85.185	0.407
comYC	Streptococcus gordonii str. Challis substr. CH1	49.398	76.852	0.38
comGC	Bacillus subtilis subsp. subtilis str. 168	40.625	88.889	0.361