Detailed information
Bioinformatically predicted
Overview
| Name | comGA | Type | Machinery gene |
| Locus tag | BEK99_RS05510 | Genome accession | NZ_CP016760 |
| Coordinates | 1097294..1098286 (+) | Length | 330 a.a. |
| NCBI ID | WP_065865449.1 | Uniprot ID | - |
| Organism | Staphylococcus carnosus strain LTH 3730 SK 13 JCM 6069 | ||
| Function | dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 1092294..1103286
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| BEK99_RS05480 (BEK99_05480) | - | 1093085..1093627 (+) | 543 | WP_015900421.1 | 5-formyltetrahydrofolate cyclo-ligase | - |
| BEK99_RS05485 (BEK99_05485) | - | 1093644..1095104 (+) | 1461 | WP_065865448.1 | rhomboid family protein | - |
| BEK99_RS05490 (BEK99_05490) | - | 1095085..1095285 (+) | 201 | WP_015900419.1 | YqgQ family protein | - |
| BEK99_RS05495 (BEK99_05495) | - | 1095285..1096271 (+) | 987 | WP_015900418.1 | ROK family glucokinase | - |
| BEK99_RS05500 (BEK99_05500) | - | 1096271..1096600 (+) | 330 | WP_015900417.1 | MTH1187 family thiamine-binding protein | - |
| BEK99_RS05505 (BEK99_05505) | - | 1096600..1097223 (+) | 624 | WP_015900416.1 | MBL fold metallo-hydrolase | - |
| BEK99_RS05510 (BEK99_05510) | comGA | 1097294..1098286 (+) | 993 | WP_065865449.1 | competence type IV pilus ATPase ComGA | Machinery gene |
| BEK99_RS13540 | - | 1098240..1098605 (+) | 366 | WP_237340565.1 | hypothetical protein | - |
| BEK99_RS13545 | comGB | 1098956..1099315 (+) | 360 | WP_237340566.1 | type II secretion system F family protein | Machinery gene |
| BEK99_RS05520 (BEK99_05520) | comGC | 1099333..1099659 (+) | 327 | WP_015900413.1 | competence type IV pilus major pilin ComGC | Machinery gene |
| BEK99_RS05525 (BEK99_05525) | comGD | 1099637..1100092 (+) | 456 | WP_041612978.1 | competence type IV pilus minor pilin ComGD | - |
| BEK99_RS05530 (BEK99_05530) | - | 1100073..1100369 (+) | 297 | WP_041612977.1 | hypothetical protein | - |
| BEK99_RS05535 (BEK99_05535) | comGF | 1100326..1100784 (+) | 459 | WP_158297486.1 | competence type IV pilus minor pilin ComGF | - |
| BEK99_RS05540 (BEK99_05540) | - | 1100955..1101494 (+) | 540 | WP_046099279.1 | shikimate kinase | - |
| BEK99_RS05545 (BEK99_05545) | gcvT | 1101685..1102780 (+) | 1096 | Protein_1082 | glycine cleavage system aminomethyltransferase GcvT | - |
Sequence
Protein
Download Length: 330 a.a. Molecular weight: 37688.57 Da Isoelectric Point: 7.1252
>NTDB_id=191932 BEK99_RS05510 WP_065865449.1 1097294..1098286(+) (comGA) [Staphylococcus carnosus strain LTH 3730 SK 13 JCM 6069]
MKRLLDTILTDAISKNVSDIHFIPIEKEVIIKFRIHDDLINYDNIEILTYSKLLTFMKFQAGLDVSNYHQAQSGQTTFKH
QKLYNLRVSTLPLSLGIESCVIRLSPQYFYQDTDRDGPKHFYHLMNKKQGLILFTGPTGSGKSTMMYEMVSFALKNLHLN
IITVEDPVEKRIAGITQISVNEKAGIDYENSFKAILRCDPDIILIGEIRDAQIAKCVIQASLSGHLVLSTLHSNDCEGAL
LRLLEMGISPQEAQQSIALISNQRLVTNQHGSRELAYETMYQSDIQYFFKHNHTMPKHFMKLSKVLTQMSEEGVICEEVL
KKYTYLFSIT
MKRLLDTILTDAISKNVSDIHFIPIEKEVIIKFRIHDDLINYDNIEILTYSKLLTFMKFQAGLDVSNYHQAQSGQTTFKH
QKLYNLRVSTLPLSLGIESCVIRLSPQYFYQDTDRDGPKHFYHLMNKKQGLILFTGPTGSGKSTMMYEMVSFALKNLHLN
IITVEDPVEKRIAGITQISVNEKAGIDYENSFKAILRCDPDIILIGEIRDAQIAKCVIQASLSGHLVLSTLHSNDCEGAL
LRLLEMGISPQEAQQSIALISNQRLVTNQHGSRELAYETMYQSDIQYFFKHNHTMPKHFMKLSKVLTQMSEEGVICEEVL
KKYTYLFSIT
Nucleotide
Download Length: 993 bp
>NTDB_id=191932 BEK99_RS05510 WP_065865449.1 1097294..1098286(+) (comGA) [Staphylococcus carnosus strain LTH 3730 SK 13 JCM 6069]
ATGAAAAGACTTTTAGATACAATTCTCACAGATGCAATTTCGAAAAATGTATCTGATATCCATTTTATTCCAATTGAAAA
AGAAGTTATAATCAAGTTCAGAATTCACGATGATTTAATTAATTATGACAATATCGAAATTCTGACTTATTCAAAGTTAC
TTACGTTTATGAAATTTCAAGCAGGGCTCGATGTATCTAATTATCATCAAGCACAAAGTGGTCAGACAACTTTCAAGCAT
CAAAAACTATATAATTTACGTGTTTCTACTTTACCGTTATCCTTAGGGATTGAGAGTTGTGTAATACGACTTTCACCCCA
GTATTTTTATCAAGATACCGATCGTGATGGTCCTAAACACTTCTATCATTTAATGAATAAAAAGCAAGGACTTATTTTAT
TCACGGGACCAACCGGTTCTGGAAAAAGTACTATGATGTATGAAATGGTTTCTTTTGCTTTAAAAAATTTGCATCTAAAT
ATTATTACTGTTGAAGACCCAGTTGAGAAAAGAATTGCTGGCATTACTCAAATTTCAGTAAATGAGAAAGCAGGTATAGA
TTATGAAAATTCATTTAAAGCTATATTACGCTGTGATCCCGATATTATACTTATTGGGGAGATAAGAGATGCTCAAATCG
CAAAATGTGTTATTCAAGCATCTCTAAGCGGACATCTAGTGCTTTCCACTTTGCATTCAAATGATTGCGAAGGAGCATTA
TTACGACTCTTGGAAATGGGTATATCTCCACAAGAAGCACAACAATCCATTGCTCTAATTTCAAATCAACGTCTAGTAAC
TAATCAACATGGAAGTAGAGAACTAGCTTATGAAACGATGTATCAATCTGATATTCAATACTTCTTCAAACATAACCATA
CAATGCCTAAACATTTTATGAAATTAAGCAAAGTACTAACTCAAATGAGTGAAGAAGGTGTTATATGTGAAGAAGTACTT
AAAAAATATACTTATCTTTTCTCTATTACCTAA
ATGAAAAGACTTTTAGATACAATTCTCACAGATGCAATTTCGAAAAATGTATCTGATATCCATTTTATTCCAATTGAAAA
AGAAGTTATAATCAAGTTCAGAATTCACGATGATTTAATTAATTATGACAATATCGAAATTCTGACTTATTCAAAGTTAC
TTACGTTTATGAAATTTCAAGCAGGGCTCGATGTATCTAATTATCATCAAGCACAAAGTGGTCAGACAACTTTCAAGCAT
CAAAAACTATATAATTTACGTGTTTCTACTTTACCGTTATCCTTAGGGATTGAGAGTTGTGTAATACGACTTTCACCCCA
GTATTTTTATCAAGATACCGATCGTGATGGTCCTAAACACTTCTATCATTTAATGAATAAAAAGCAAGGACTTATTTTAT
TCACGGGACCAACCGGTTCTGGAAAAAGTACTATGATGTATGAAATGGTTTCTTTTGCTTTAAAAAATTTGCATCTAAAT
ATTATTACTGTTGAAGACCCAGTTGAGAAAAGAATTGCTGGCATTACTCAAATTTCAGTAAATGAGAAAGCAGGTATAGA
TTATGAAAATTCATTTAAAGCTATATTACGCTGTGATCCCGATATTATACTTATTGGGGAGATAAGAGATGCTCAAATCG
CAAAATGTGTTATTCAAGCATCTCTAAGCGGACATCTAGTGCTTTCCACTTTGCATTCAAATGATTGCGAAGGAGCATTA
TTACGACTCTTGGAAATGGGTATATCTCCACAAGAAGCACAACAATCCATTGCTCTAATTTCAAATCAACGTCTAGTAAC
TAATCAACATGGAAGTAGAGAACTAGCTTATGAAACGATGTATCAATCTGATATTCAATACTTCTTCAAACATAACCATA
CAATGCCTAAACATTTTATGAAATTAAGCAAAGTACTAACTCAAATGAGTGAAGAAGGTGTTATATGTGAAGAAGTACTT
AAAAAATATACTTATCTTTTCTCTATTACCTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comGA | Staphylococcus aureus MW2 |
60.681 |
97.879 |
0.594 |
| comGA | Staphylococcus aureus N315 |
60.681 |
97.879 |
0.594 |