Detailed information
Bioinformatically predicted
Overview
| Name | comEA | Type | Machinery gene |
| Locus tag | A8140_RS04930 | Genome accession | NZ_CP015863 |
| Coordinates | 1016565..1016852 (+) | Length | 95 a.a. |
| NCBI ID | WP_005425566.1 | Uniprot ID | A0A812FIP9 |
| Organism | Vibrio campbellii CAIM 519 = NBRC 15631 = ATCC 25920 strain ATCC 25920 CAIM 519T | ||
| Function | dsDNA binding (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 1011565..1021852
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| A8140_RS04920 (A8140_04730) | - | 1014073..1014345 (+) | 273 | WP_005430934.1 | HU family DNA-binding protein | - |
| A8140_RS04925 (A8140_04735) | ppiD | 1014560..1016419 (+) | 1860 | WP_005529910.1 | peptidylprolyl isomerase | - |
| A8140_RS04930 (A8140_04740) | comEA | 1016565..1016852 (+) | 288 | WP_005425566.1 | ComEA family DNA-binding protein | Machinery gene |
| A8140_RS04935 (A8140_04745) | rrtA | 1017003..1017554 (-) | 552 | WP_005529909.1 | rhombosortase | - |
| A8140_RS04940 (A8140_04750) | - | 1017558..1018175 (+) | 618 | WP_005529908.1 | tRNA-uridine aminocarboxypropyltransferase | - |
| A8140_RS04945 (A8140_04755) | - | 1018196..1019530 (-) | 1335 | WP_032999978.1 | anti-phage deoxyguanosine triphosphatase | - |
| A8140_RS04950 (A8140_04760) | yfbR | 1019534..1020118 (-) | 585 | WP_005425568.1 | 5'-deoxynucleotidase | - |
| A8140_RS04955 (A8140_04765) | - | 1020202..1021416 (-) | 1215 | WP_005529906.1 | pyridoxal phosphate-dependent aminotransferase | - |
Sequence
Protein
Download Length: 95 a.a. Molecular weight: 10534.24 Da Isoelectric Point: 5.8692
>NTDB_id=182583 A8140_RS04930 WP_005425566.1 1016565..1016852(+) (comEA) [Vibrio campbellii CAIM 519 = NBRC 15631 = ATCC 25920 strain ATCC 25920 CAIM 519T]
MKWMLTLCLLILAPMSWAETKTKADKYEGIEITVNVNSATAEEIATLLNGIGEKKAQDIVEYRNEHGPFKTAADLTKVKG
IGEATVKKNEDRILL
MKWMLTLCLLILAPMSWAETKTKADKYEGIEITVNVNSATAEEIATLLNGIGEKKAQDIVEYRNEHGPFKTAADLTKVKG
IGEATVKKNEDRILL
Nucleotide
Download Length: 288 bp
>NTDB_id=182583 A8140_RS04930 WP_005425566.1 1016565..1016852(+) (comEA) [Vibrio campbellii CAIM 519 = NBRC 15631 = ATCC 25920 strain ATCC 25920 CAIM 519T]
ATGAAATGGATGTTAACGCTGTGCTTATTGATACTCGCGCCGATGAGCTGGGCGGAAACAAAGACTAAAGCAGATAAGTA
TGAAGGTATTGAGATTACGGTTAACGTTAACTCTGCCACTGCAGAAGAGATTGCAACGCTACTTAATGGTATTGGTGAGA
AGAAAGCGCAAGATATTGTTGAGTATCGCAACGAGCACGGTCCATTTAAAACAGCTGCGGATCTTACCAAGGTGAAAGGC
ATCGGTGAGGCGACTGTTAAGAAGAACGAAGACCGCATCCTGCTGTAA
ATGAAATGGATGTTAACGCTGTGCTTATTGATACTCGCGCCGATGAGCTGGGCGGAAACAAAGACTAAAGCAGATAAGTA
TGAAGGTATTGAGATTACGGTTAACGTTAACTCTGCCACTGCAGAAGAGATTGCAACGCTACTTAATGGTATTGGTGAGA
AGAAAGCGCAAGATATTGTTGAGTATCGCAACGAGCACGGTCCATTTAAAACAGCTGCGGATCTTACCAAGGTGAAAGGC
ATCGGTGAGGCGACTGTTAAGAAGAACGAAGACCGCATCCTGCTGTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comEA | Vibrio campbellii strain DS40M4 |
96.842 |
100 |
0.968 |
| comEA | Vibrio parahaemolyticus RIMD 2210633 |
80 |
100 |
0.8 |
| comEA | Vibrio cholerae C6706 |
58.333 |
100 |
0.589 |
| comEA | Vibrio cholerae strain A1552 |
58.333 |
100 |
0.589 |
| comE1/comEA | Haemophilus influenzae Rd KW20 |
39.286 |
100 |
0.463 |
| comE | Neisseria gonorrhoeae MS11 |
39.785 |
97.895 |
0.389 |
| comE | Neisseria gonorrhoeae MS11 |
39.785 |
97.895 |
0.389 |
| comE | Neisseria gonorrhoeae MS11 |
39.785 |
97.895 |
0.389 |
| comE | Neisseria gonorrhoeae MS11 |
39.785 |
97.895 |
0.389 |
| comEA | Acinetobacter baylyi ADP1 |
48.649 |
77.895 |
0.379 |
| comEA/comE1 | Glaesserella parasuis strain SC1401 |
56.452 |
65.263 |
0.368 |