Detailed information NTG0170011

Bioinformatically predicted

Overview

• Name: ssbA
• Type: Machinery gene
• Locus tag: AXE83_RS07670
• Genome accession: NZ_CP014264
• Coordinates: 1626383..1626853 (-)
• Length: 156 a.a.
• NCBI ID: WP_049549356.1
• Uniprot ID: A0A1E8TQ39
• Organism: Streptococcus sp. oral taxon 431 strain F0610 (5-114)
• Function: ssDNA binding (predicted from homology) DNA processing

Genomic Context

Location: 1621383..1631853

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
AXE83_RS07640 (AXE83_07640)	-	1622400..1622684 (-)	285	WP_060956019.1	GIY-YIG nuclease family protein	-
AXE83_RS07645 (AXE83_07645)	-	1622674..1623420 (-)	747	WP_049549354.1	tRNA1(Val) (adenine(37)-N6)-methyltransferase	-
AXE83_RS07650 (AXE83_07650)	-	1623470..1623832 (-)	363	WP_060956020.1	S1 RNA-binding domain-containing protein	-
AXE83_RS07655 (AXE83_07655)	-	1623834..1625234 (-)	1401	WP_060956021.1	bifunctional Cof-type HAD-IIB family hydrolase/peptidylprolyl isomerase	-
AXE83_RS07660 (AXE83_07660)	-	1625315..1625818 (-)	504	WP_060956393.1	GNAT family N-acetyltransferase	-
AXE83_RS07665 (AXE83_07665)	rpsR	1626112..1626351 (-)	240	WP_000068664.1	30S ribosomal protein S18	-
AXE83_RS07670 (AXE83_07670)	ssbA	1626383..1626853 (-)	471	WP_049549356.1	single-stranded DNA-binding protein SsbA	Machinery gene
AXE83_RS07675 (AXE83_07675)	rpsF	1626865..1627155 (-)	291	WP_049530661.1	30S ribosomal protein S6	-
AXE83_RS07680 (AXE83_07680)	-	1627284..1627940 (-)	657	WP_060956022.1	CBS domain-containing protein	-
AXE83_RS07685 (AXE83_07685)	-	1628317..1629027 (-)	711	WP_060956023.1	ABC transporter ATP-binding protein	-
AXE83_RS07690 (AXE83_07690)	-	1629027..1629791 (-)	765	WP_001185990.1	ABC transporter ATP-binding protein	-
AXE83_RS07695 (AXE83_07695)	-	1629791..1630747 (-)	957	WP_049549360.1	branched-chain amino acid ABC transporter permease	-
AXE83_RS07700 (AXE83_07700)	-	1630751..1631620 (-)	870	WP_060956024.1	branched-chain amino acid ABC transporter permease	-

Sequence

Protein

• Length: 156 a.a.
• Molecular weight: 17368.20 Da
• Isoelectric Point: 4.9164

>NTDB_id=170011 AXE83_RS07670 WP_049549356.1 1626383..1626853(-) (ssbA) [Streptococcus sp. oral taxon 431 strain F0610 (5-114)]
MINNVVLVGRMTRDAELRYTPSNVAVATFTLAVNRTFKSQNGEREADFINVVMWRQQAENLANWAKKGSLIGVTGRIQTR
SYDNQQGQRVYVTEVVAENFQMLESRSVREGHTGGAYSAPSSNYSAPTQSVPDFSRDENPFGATNPLDISDDDLPF

Nucleotide

• Length: 471 bp

>NTDB_id=170011 AXE83_RS07670 WP_049549356.1 1626383..1626853(-) (ssbA) [Streptococcus sp. oral taxon 431 strain F0610 (5-114)]
ATGATTAACAATGTTGTACTTGTAGGGCGTATGACTCGTGACGCTGAGTTGCGTTATACCCCATCAAATGTAGCAGTTGC
GACTTTTACTCTTGCAGTAAACCGTACATTTAAGAGTCAAAATGGTGAACGTGAGGCTGATTTTATCAATGTCGTTATGT
GGCGCCAACAGGCTGAAAATCTTGCTAACTGGGCTAAAAAAGGCTCGCTTATCGGGGTGACAGGTCGTATCCAGACTCGT
AGTTACGATAACCAGCAAGGACAACGTGTCTACGTAACAGAAGTCGTGGCTGAGAATTTCCAAATGTTGGAAAGCCGTAG
TGTGCGTGAAGGACATACAGGTGGAGCTTATTCTGCACCAAGTTCAAACTACTCAGCACCTACACAATCAGTACCTGACT
TTTCACGTGATGAAAATCCATTCGGAGCAACTAATCCTTTGGATATTTCAGATGATGATTTACCATTCTAA

Domains

Predicted by InterproScan.

• Single-strand binding protein family (SSB) (2-103)

3D structure

• AlphaFold DB: A0A1E8TQ39

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
ssbA	Bacillus subtilis subsp. subtilis str. 168	55.233	100	0.609
ssb	Latilactobacillus sakei subsp. sakei 23K	54.706	100	0.596
ssbB/cilA	Streptococcus pneumoniae TIGR4	51.282	75	0.385
ssbB	Bacillus subtilis subsp. subtilis str. 168	55.66	67.949	0.378
ssbB/cilA	Streptococcus pneumoniae R6	50.427	75	0.378
ssbB/cilA	Streptococcus mitis SK321	50.427	75	0.378
ssbB/cilA	Streptococcus mitis NCTC 12261	50.427	75	0.378
ssbB/cilA	Streptococcus pneumoniae Rx1	50.427	75	0.378
ssbB/cilA	Streptococcus pneumoniae D39	50.427	75	0.378
ssbB	Streptococcus sobrinus strain NIDR 6715-7	54.128	69.872	0.378