Detailed information    

insolico Bioinformatically predicted

Overview

Name   comEA/celA/cilE   Type   Machinery gene
Locus tag   AXE83_RS06565 Genome accession   NZ_CP014264
Coordinates   1397860..1398501 (-) Length   213 a.a.
NCBI ID   WP_049528175.1    Uniprot ID   A0A0X8JYL3
Organism   Streptococcus sp. oral taxon 431 strain F0610 (5-114)     
Function   dsDNA binding to the cell surface (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 1392860..1403501
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  AXE83_RS06545 (AXE83_06545) - 1393489..1393689 (-) 201 WP_001054551.1 F0F1 ATP synthase subunit C -
  AXE83_RS06550 (AXE83_06550) - 1393919..1394230 (-) 312 WP_060955850.1 CHY zinc finger protein -
  AXE83_RS06555 (AXE83_06555) - 1394245..1395531 (-) 1287 WP_060955851.1 U32 family peptidase -
  AXE83_RS06560 (AXE83_06560) comEC/celB 1395657..1397876 (-) 2220 WP_060955852.1 ComEC/Rec2 family competence protein Machinery gene
  AXE83_RS06565 (AXE83_06565) comEA/celA/cilE 1397860..1398501 (-) 642 WP_049528175.1 helix-hairpin-helix domain-containing protein Machinery gene
  AXE83_RS06570 (AXE83_06570) - 1398567..1399136 (-) 570 WP_049528167.1 GNAT family N-acetyltransferase -
  AXE83_RS06575 (AXE83_06575) ald 1399305..1400417 (+) 1113 WP_049528166.1 alanine dehydrogenase -

Sequence

Protein


Download         Length: 213 a.a.        Molecular weight: 23067.20 Da        Isoelectric Point: 5.0508

>NTDB_id=170004 AXE83_RS06565 WP_049528175.1 1397860..1398501(-) (comEA/celA/cilE) [Streptococcus sp. oral taxon 431 strain F0610 (5-114)]
MEELIEKIKEYKIIVICAGLGLVLGGFFLLKPVAQTPAKESNLQSEVIAVPKDSTDEKEDGNQKEEVVEQDLITVDVKGA
VKTPGIYDLPVGSRINDAVQKAGGLTDNADSKSINLAQKISDEALVYVPTKEEATSQATQSNASNSKENKKVNLNKASLE
ELKQVKGLGAKRAQDIIDHRDSNGKFKSVDELKKVSGIGAKTIEKLKEYVTVD

Nucleotide


Download         Length: 642 bp        

>NTDB_id=170004 AXE83_RS06565 WP_049528175.1 1397860..1398501(-) (comEA/celA/cilE) [Streptococcus sp. oral taxon 431 strain F0610 (5-114)]
ATGGAAGAACTTATTGAGAAAATCAAAGAATATAAAATCATTGTTATCTGTGCTGGTTTGGGTTTGGTCTTGGGTGGATT
TTTCCTCCTAAAACCAGTCGCTCAAACACCTGCTAAGGAAAGTAATTTGCAGTCTGAAGTTATAGCTGTTCCAAAGGATT
CGACGGATGAAAAGGAAGATGGAAATCAGAAGGAAGAAGTGGTGGAGCAAGATCTGATTACTGTCGATGTCAAAGGGGCT
GTCAAAACACCAGGGATTTATGATTTGCCAGTTGGAAGTCGTATCAATGATGCTGTTCAAAAAGCTGGTGGACTGACAGA
TAATGCAGACAGTAAATCTATCAATCTTGCTCAGAAAATTAGTGACGAAGCACTTGTCTATGTTCCAACTAAGGAAGAAG
CTACCAGTCAAGCAACACAATCAAATGCTTCTAACAGCAAGGAAAATAAGAAAGTCAATCTCAATAAAGCCAGTTTAGAG
GAACTGAAACAAGTCAAAGGCTTAGGTGCTAAACGTGCTCAAGATATTATTGACCATCGTGATTCCAACGGTAAGTTTAA
GTCAGTTGATGAGCTCAAAAAGGTTTCTGGTATTGGTGCAAAAACGATAGAAAAGTTAAAAGAGTATGTTACAGTGGATT
AG

Domains

Predicted by InterproScan.

Helix-hairpin-helix motif (HHH_3)

(149-211)

SLBB domain (SLBB)

(75-126)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A0X8JYL3

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comEA/celA/cilE Streptococcus pneumoniae TIGR4

79.167

100

0.803
  comEA/celA/cilE Streptococcus mitis NCTC 12261

78.241

100

0.793
  comEA/celA/cilE Streptococcus pneumoniae Rx1

78.241

100

0.793
  comEA/celA/cilE Streptococcus pneumoniae D39

78.241

100

0.793
  comEA/celA/cilE Streptococcus pneumoniae R6

78.241

100

0.793
  comEA/celA/cilE Streptococcus mitis SK321

77.778

100

0.789
  comEA Lactococcus lactis subsp. cremoris KW2

39.732

100

0.418
  comEA Staphylococcus aureus MW2

35.16

100

0.362
  comEA Staphylococcus aureus N315

35.16

100

0.362

Multiple sequence alignment