Detailed information
Bioinformatically predicted
Overview
| Name | pilA/pilAI | Type | Machinery gene |
| Locus tag | AL480_RS13285 | Genome accession | NZ_CP014014 |
| Coordinates | 2757841..2758248 (-) | Length | 135 a.a. |
| NCBI ID | WP_033833108.1 | Uniprot ID | - |
| Organism | Stenotrophomonas maltophilia strain FDAARGOS_92 | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 2752841..2763248
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| AL480_RS13275 (AL480_13275) | pilR | 2754385..2755758 (+) | 1374 | WP_033833106.1 | sigma-54 dependent transcriptional regulator | Regulator |
| AL480_RS13280 (AL480_13280) | pilB | 2755885..2757618 (-) | 1734 | WP_033833107.1 | type IV-A pilus assembly ATPase PilB | Machinery gene |
| AL480_RS13285 (AL480_13285) | pilA/pilAI | 2757841..2758248 (-) | 408 | WP_033833108.1 | pilin | Machinery gene |
| AL480_RS13290 (AL480_13290) | - | 2758398..2758826 (-) | 429 | WP_033833109.1 | pilin | - |
| AL480_RS13295 (AL480_13295) | pilC | 2759179..2760438 (+) | 1260 | WP_033833111.1 | type II secretion system F family protein | Machinery gene |
| AL480_RS13300 (AL480_13300) | - | 2760446..2761309 (+) | 864 | WP_005410800.1 | A24 family peptidase | - |
| AL480_RS13305 (AL480_13305) | coaE | 2761321..2761932 (+) | 612 | WP_033833112.1 | dephospho-CoA kinase | - |
| AL480_RS13310 (AL480_13310) | - | 2762125..2762511 (-) | 387 | WP_104920827.1 | hypothetical protein | - |
Sequence
Protein
Download Length: 135 a.a. Molecular weight: 14373.58 Da Isoelectric Point: 5.6071
>NTDB_id=167195 AL480_RS13285 WP_033833108.1 2757841..2758248(-) (pilA/pilAI) [Stenotrophomonas maltophilia strain FDAARGOS_92]
MNTQKGFTLIELMIVVAIIAILAAIGTVVFQPYIVRTQLTAALADISPGKMLFETVIYEGRSASLITPEFIGGAQNAHCS
NVEAELSESGVGHISCTLKGHSALDGKDLILRRSAEGIWSCDGSAFEARYRPTGC
MNTQKGFTLIELMIVVAIIAILAAIGTVVFQPYIVRTQLTAALADISPGKMLFETVIYEGRSASLITPEFIGGAQNAHCS
NVEAELSESGVGHISCTLKGHSALDGKDLILRRSAEGIWSCDGSAFEARYRPTGC
Nucleotide
Download Length: 408 bp
>NTDB_id=167195 AL480_RS13285 WP_033833108.1 2757841..2758248(-) (pilA/pilAI) [Stenotrophomonas maltophilia strain FDAARGOS_92]
ATGAACACGCAGAAGGGCTTCACGCTCATCGAACTGATGATCGTCGTGGCCATCATCGCCATCCTGGCAGCGATCGGGAC
AGTCGTATTTCAGCCGTACATAGTCCGGACGCAGCTCACTGCTGCACTGGCAGACATCAGTCCGGGCAAGATGCTTTTTG
AAACGGTCATCTACGAGGGCCGTTCCGCCAGTCTGATCACCCCCGAATTCATCGGCGGTGCCCAGAACGCCCACTGCTCC
AACGTCGAGGCCGAACTCAGTGAATCCGGTGTCGGCCACATCAGCTGCACCTTGAAGGGTCACAGCGCGCTTGACGGCAA
GGACCTGATCCTGCGCCGCTCGGCCGAGGGCATCTGGAGCTGCGATGGCAGCGCGTTCGAAGCGCGCTATCGCCCGACCG
GCTGCTGA
ATGAACACGCAGAAGGGCTTCACGCTCATCGAACTGATGATCGTCGTGGCCATCATCGCCATCCTGGCAGCGATCGGGAC
AGTCGTATTTCAGCCGTACATAGTCCGGACGCAGCTCACTGCTGCACTGGCAGACATCAGTCCGGGCAAGATGCTTTTTG
AAACGGTCATCTACGAGGGCCGTTCCGCCAGTCTGATCACCCCCGAATTCATCGGCGGTGCCCAGAACGCCCACTGCTCC
AACGTCGAGGCCGAACTCAGTGAATCCGGTGTCGGCCACATCAGCTGCACCTTGAAGGGTCACAGCGCGCTTGACGGCAA
GGACCTGATCCTGCGCCGCTCGGCCGAGGGCATCTGGAGCTGCGATGGCAGCGCGTTCGAAGCGCGCTATCGCCCGACCG
GCTGCTGA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilA/pilAI | Pseudomonas stutzeri DSM 10701 |
49.265 |
100 |
0.496 |
| pilA/pilAII | Pseudomonas stutzeri DSM 10701 |
42.647 |
100 |
0.43 |
| pilA | Acinetobacter baumannii strain A118 |
40.146 |
100 |
0.407 |
| pilA2 | Legionella pneumophila strain ERS1305867 |
37.681 |
100 |
0.385 |
| pilA | Pseudomonas aeruginosa PAK |
33.117 |
100 |
0.378 |
| pilA2 | Legionella pneumophila str. Paris |
36.567 |
99.259 |
0.363 |