Detailed information    

insolico Bioinformatically predicted

Overview

Name   cinA   Type   Machinery gene
Locus tag   ATN06_RS19155 Genome accession   NZ_CP013274
Coordinates   3702985..3704223 (-) Length   412 a.a.
NCBI ID   WP_060631949.1    Uniprot ID   A0A243GHQ4
Organism   Bacillus thuringiensis strain CTC     
Function   unknown (predicted from homology)   
Unclear

Genomic Context

Location: 3697985..3709223
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ATN06_RS19130 (ATN06_18900) spoVS 3698242..3698502 (-) 261 WP_000404341.1 stage V sporulation protein SpoVS -
  ATN06_RS19135 (ATN06_18905) - 3698652..3699446 (-) 795 WP_060631946.1 TIGR00282 family metallophosphoesterase -
  ATN06_RS19140 (ATN06_18910) rny 3699765..3701327 (-) 1563 WP_000204911.1 ribonuclease Y -
  ATN06_RS19150 (ATN06_18920) recA 3701809..3702840 (-) 1032 WP_060631948.1 recombinase RecA Machinery gene
  ATN06_RS19155 (ATN06_18925) cinA 3702985..3704223 (-) 1239 WP_060631949.1 competence/damage-inducible protein CinA Machinery gene
  ATN06_RS19160 (ATN06_18930) pgsA 3704244..3704822 (-) 579 WP_060631950.1 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase -
  ATN06_RS19165 (ATN06_18935) - 3704886..3705797 (-) 912 WP_060631951.1 helix-turn-helix domain-containing protein -
  ATN06_RS19170 (ATN06_18940) - 3705819..3706604 (-) 786 WP_000574107.1 DUF3388 domain-containing protein -
  ATN06_RS19175 (ATN06_18945) - 3706744..3706992 (-) 249 WP_000114455.1 DUF3243 domain-containing protein -
  ATN06_RS19180 (ATN06_18950) ymfI 3707070..3707783 (-) 714 WP_060631952.1 elongation factor P 5-aminopentanone reductase -
  ATN06_RS19185 (ATN06_18955) yfmH 3707887..3709173 (-) 1287 WP_060631953.1 EF-P 5-aminopentanol modification-associated protein YfmH -

Sequence

Protein


Download         Length: 412 a.a.        Molecular weight: 45310.58 Da        Isoelectric Point: 5.1079

>NTDB_id=161285 ATN06_RS19155 WP_060631949.1 3702985..3704223(-) (cinA) [Bacillus thuringiensis strain CTC]
MNAEIIAVGTELLLGQIANTNAQFLSEKLASIGINVYYHTVVGDNNKRLQQAIEVAEERADMLIFTGGLGPTKDDLTKET
ISSCLGGELVYDEKALASISDYFKRTGREFTENNKKQALVLDGATVFANDHGMAPGMGLDKNGKVYILLPGPPKEMKPMY
VSYVEPFLCNFTTGENIYSRVLRFFGIGESQLEVKVQDLIDGQTNPTIAPLANDGEVTLRLTAKHQNVSEAEKLIQHVED
LILERVGEFFYGYDQEFLHYKAIELLKRKGLTLACAESLTGGLFGNQVTENAGVSSVFKGGVICYHNDVKQHVLRVPEEV
LHTDGAVSKECARYLAENVKDLLKADIGISFTGVAGPDASEQKEPGTVFVGLAIKGEQTAVFPLNLSGSRQQIRERSAKY
GFYHLYKKLEEI

Nucleotide


Download         Length: 1239 bp        

>NTDB_id=161285 ATN06_RS19155 WP_060631949.1 3702985..3704223(-) (cinA) [Bacillus thuringiensis strain CTC]
ATGAATGCTGAAATTATTGCGGTTGGAACTGAATTATTACTTGGACAAATTGCAAATACAAATGCCCAGTTTTTATCTGA
GAAGTTAGCTTCAATTGGAATTAATGTGTACTACCATACTGTAGTTGGAGATAATAACAAACGATTACAGCAGGCGATTG
AAGTTGCGGAAGAACGTGCTGACATGCTTATTTTCACAGGTGGATTAGGTCCGACAAAAGATGATCTGACGAAAGAAACG
ATATCTTCTTGTTTGGGTGGAGAGCTTGTGTATGATGAAAAAGCATTAGCCTCAATAAGCGATTACTTTAAGCGTACAGG
CCGCGAATTCACGGAGAATAATAAAAAGCAGGCGCTCGTTTTGGATGGAGCAACTGTATTTGCGAATGATCACGGTATGG
CACCTGGTATGGGGTTAGATAAGAACGGAAAAGTTTATATTTTATTACCAGGACCACCAAAAGAGATGAAGCCGATGTAT
GTAAGTTATGTAGAGCCTTTTTTATGTAACTTTACAACAGGAGAAAACATTTATTCTCGTGTGCTTCGTTTCTTCGGTAT
TGGGGAGTCCCAATTAGAGGTGAAAGTTCAAGATTTAATTGATGGACAAACAAACCCAACAATCGCCCCGCTAGCAAATG
ATGGAGAAGTGACATTACGTTTAACCGCTAAGCATCAAAATGTTAGCGAAGCGGAGAAACTAATTCAACATGTGGAAGAT
TTGATTTTAGAAAGAGTAGGAGAATTTTTCTACGGATATGACCAAGAATTTTTGCATTATAAGGCAATTGAGTTATTGAA
GAGAAAAGGGTTAACCTTAGCATGTGCAGAAAGTTTAACAGGTGGTCTTTTTGGAAATCAAGTAACTGAAAATGCTGGTG
TTTCTTCTGTATTTAAAGGCGGTGTCATTTGTTATCATAATGATGTGAAGCAACATGTTTTACGTGTGCCTGAAGAAGTG
TTGCATACTGATGGTGCAGTTAGTAAAGAATGTGCTCGTTATCTTGCTGAAAATGTTAAGGATTTATTAAAAGCGGATAT
CGGAATTAGTTTCACTGGGGTAGCAGGGCCAGATGCTTCAGAACAGAAAGAGCCAGGAACAGTATTTGTTGGATTAGCGA
TTAAAGGTGAACAAACTGCAGTCTTTCCTCTTAATTTAAGTGGAAGTCGTCAACAAATTAGAGAACGATCAGCAAAATAT
GGATTTTATCATTTATATAAAAAGCTAGAAGAGATATAA

Domains

Predicted by InterproScan.

Probable molybdopterin binding domain (MoCF_biosynth)

(5-168)

Competence-damaged protein (CinA)

(258-408)

Damage-inducible protein CinA KH domain (CinA_KH)

(179-252)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A243GHQ4

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  cinA Bacillus subtilis subsp. subtilis str. 168

59.024

99.515

0.587
  cinA Streptococcus mitis SK321

47.017

100

0.478
  cinA Streptococcus pneumoniae TIGR4

47.017

100

0.478
  cinA Streptococcus mitis NCTC 12261

46.539

100

0.473
  cinA Streptococcus pneumoniae Rx1

46.539

100

0.473
  cinA Streptococcus pneumoniae R6

46.539

100

0.473
  cinA Streptococcus pneumoniae D39

46.301

100

0.471
  cinA Streptococcus mutans UA159

45.567

98.544

0.449
  cinA Streptococcus suis isolate S10

41.114

91.505

0.376

Multiple sequence alignment