Detailed information NTG0161016

Bioinformatically predicted

Overview

• Name: ssbA
• Type: Machinery gene
• Locus tag: APQ13_RS08715
• Genome accession: NZ_CP013237
• Coordinates: 1799449..1799844 (+)
• Length: 131 a.a.
• NCBI ID: WP_002269471.1
• Uniprot ID: A0A829BS80
• Organism: Streptococcus mutans strain NG8 isolate Dental Plaque
• Function: ssDNA binding (predicted from homology) DNA processing

Genomic Context

Location: 1794449..1804844

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
APQ13_RS08675 (APQ13_08655)	-	1794547..1795209 (+)	663	WP_002266816.1	CPBP family intramembrane glutamic endopeptidase	-
APQ13_RS08680 (APQ13_08660)	proC	1795295..1796065 (-)	771	WP_002267840.1	pyrroline-5-carboxylate reductase	-
APQ13_RS08685 (APQ13_08665)	pepA	1796121..1797188 (-)	1068	WP_002264005.1	glutamyl aminopeptidase	-
APQ13_RS08690 (APQ13_08670)	-	1797248..1797556 (+)	309	WP_002277067.1	DUF4651 domain-containing protein	-
APQ13_RS08695 (APQ13_08675)	-	1797534..1797863 (+)	330	WP_002264003.1	thioredoxin family protein	-
APQ13_RS08700 (APQ13_08680)	ytpR	1797860..1798486 (+)	627	WP_002267841.1	YtpR family tRNA-binding protein	-
APQ13_RS08705 (APQ13_08685)	-	1798575..1799006 (+)	432	WP_018110218.1	MarR family winged helix-turn-helix transcriptional regulator	-
APQ13_RS08710 (APQ13_08690)	-	1799006..1799362 (+)	357	WP_002264000.1	rhodanese-like domain-containing protein	-
APQ13_RS08715 (APQ13_08695)	ssbA	1799449..1799844 (+)	396	WP_002269471.1	single-stranded DNA-binding protein	Machinery gene
APQ13_RS08720 (APQ13_08700)	-	1800260..1801222 (+)	963	WP_002263455.1	sugar ABC transporter substrate-binding protein	-
APQ13_RS08725 (APQ13_08705)	-	1801222..1802544 (+)	1323	WP_002263456.1	sensor histidine kinase	-
APQ13_RS08730 (APQ13_08710)	-	1802544..1803224 (+)	681	WP_002263457.1	response regulator transcription factor	-
APQ13_RS08735 (APQ13_08715)	-	1803217..1804524 (+)	1308	WP_002267844.1	extracellular solute-binding protein	-
APQ13_RS10425	-	1804590..1804793 (+)	204	Protein_1698	hypothetical protein	-

Sequence

Protein

• Length: 131 a.a.
• Molecular weight: 14853.96 Da
• Isoelectric Point: 6.4855

>NTDB_id=161016 APQ13_RS08715 WP_002269471.1 1799449..1799844(+) (ssbA) [Streptococcus mutans strain NG8 isolate Dental Plaque]
MYNKVILIGRLVATPEMVKTPKDKSVTRVTLAVNRRFKSQDGEKQADFVNVVLWGRLAEIIASYGSKGSLISLDGELRTR
KYEKDGVTHFVTEVLGHSFQLLESRAQRAMRENNSENDLADLVLEEEELPF

Nucleotide

• Length: 396 bp

>NTDB_id=161016 APQ13_RS08715 WP_002269471.1 1799449..1799844(+) (ssbA) [Streptococcus mutans strain NG8 isolate Dental Plaque]
ATGTATAATAAAGTTATTTTGATTGGTCGTTTAGTTGCGACACCTGAAATGGTAAAAACACCAAAGGATAAGTCTGTTAC
GCGCGTGACACTGGCTGTCAATCGGCGATTTAAAAGTCAAGATGGGGAAAAGCAGGCTGATTTTGTCAATGTTGTTCTTT
GGGGCAGATTGGCAGAAATAATAGCTTCCTATGGTAGTAAGGGAAGTCTCATCTCTCTTGATGGAGAATTGCGTACCCGT
AAATATGAAAAAGATGGCGTCACTCATTTTGTGACTGAAGTTTTGGGACACTCCTTTCAATTACTGGAAAGTCGTGCTCA
ACGTGCTATGCGTGAAAATAATTCTGAAAATGATTTGGCCGATTTGGTTCTGGAAGAGGAGGAACTCCCTTTTTAA

Domains

Predicted by InterproScan.

• Single-strand binding protein family (SSB) (3-101)

3D structure

• AlphaFold DB: A0A829BS80

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
ssbA	Streptococcus mutans UA159	99.237	100	0.992
ssbB	Streptococcus sobrinus strain NIDR 6715-7	78.626	100	0.786
ssbB/cilA	Streptococcus pneumoniae TIGR4	74.809	100	0.748
ssbB/cilA	Streptococcus pneumoniae Rx1	74.046	100	0.74
ssbB/cilA	Streptococcus pneumoniae D39	74.046	100	0.74
ssbB/cilA	Streptococcus pneumoniae R6	74.046	100	0.74
ssbB/cilA	Streptococcus mitis SK321	74.046	100	0.74
ssbB/cilA	Streptococcus mitis NCTC 12261	73.282	100	0.733
ssbB	Lactococcus lactis subsp. cremoris KW2	57.143	85.496	0.489
ssbA	Bacillus subtilis subsp. subtilis str. 168	50	80.916	0.405