Detailed information
Bioinformatically predicted
Overview
| Name | pilA/pilAI | Type | Machinery gene |
| Locus tag | BC375_RS10875 | Genome accession | NZ_CP016610 |
| Coordinates | 2246875..2247321 (+) | Length | 148 a.a. |
| NCBI ID | WP_010894960.1 | Uniprot ID | Q9PAH9 |
| Organism | Xylella fastidiosa strain Salento-2 | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
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Genomic Context
Location: 2241875..2252321
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| BC375_RS10855 (BC375_10170) | - | 2242115..2243452 (+) | 1338 | WP_023908103.1 | HAMP domain-containing sensor histidine kinase | - |
| BC375_RS10860 (BC375_10175) | coaE | 2243719..2244342 (-) | 624 | WP_046418843.1 | dephospho-CoA kinase | - |
| BC375_RS10865 (BC375_10180) | pilD | 2244354..2245217 (-) | 864 | WP_010894958.1 | A24 family peptidase | Machinery gene |
| BC375_RS10870 (BC375_10185) | pilC | 2245224..2246426 (-) | 1203 | WP_010894959.1 | type II secretion system F family protein | Machinery gene |
| BC375_RS10875 (BC375_10190) | pilA/pilAI | 2246875..2247321 (+) | 447 | WP_010894960.1 | pilin | Machinery gene |
| BC375_RS10880 (BC375_10195) | - | 2247582..2247785 (-) | 204 | WP_230950314.1 | hypothetical protein | - |
| BC375_RS10885 (BC375_10200) | pilA | 2248617..2249054 (+) | 438 | WP_046418469.1 | pilin | Machinery gene |
| BC375_RS10895 (BC375_10210) | pilB | 2249892..2251625 (+) | 1734 | WP_046418464.1 | type IV-A pilus assembly ATPase PilB | Machinery gene |
Sequence
Protein
Download Length: 148 a.a. Molecular weight: 15363.49 Da Isoelectric Point: 8.4988
>NTDB_id=160760 BC375_RS10875 WP_010894960.1 2246875..2247321(+) (pilA/pilAI) [Xylella fastidiosa strain Salento-2]
MKKQQGFNLIELMIVIAIIAVLAAIALPMYQNYVARSQLTAALADITPGKVQAESLIADGKSTSNASDIGLRTDTTRCGI
TVKVDAAGTANITCKVKGNSQVNDKTIAWDRTSDNSAGTNGVNNGGVWTCSSTVTSDALRPSGCIASK
MKKQQGFNLIELMIVIAIIAVLAAIALPMYQNYVARSQLTAALADITPGKVQAESLIADGKSTSNASDIGLRTDTTRCGI
TVKVDAAGTANITCKVKGNSQVNDKTIAWDRTSDNSAGTNGVNNGGVWTCSSTVTSDALRPSGCIASK
Nucleotide
Download Length: 447 bp
>NTDB_id=160760 BC375_RS10875 WP_010894960.1 2246875..2247321(+) (pilA/pilAI) [Xylella fastidiosa strain Salento-2]
ATGAAAAAGCAACAAGGTTTTAACTTAATCGAACTAATGATCGTCATTGCAATCATTGCTGTCCTAGCAGCCATCGCGCT
GCCTATGTACCAAAATTATGTCGCCAGATCCCAACTCACCGCGGCACTGGCCGACATCACGCCGGGCAAAGTGCAAGCCG
AGTCTCTGATTGCTGATGGGAAGAGTACATCCAACGCGAGTGATATTGGTCTGCGTACCGACACCACTCGTTGTGGGATT
ACCGTTAAAGTCGATGCCGCTGGCACTGCCAACATCACATGCAAAGTTAAGGGCAACTCTCAAGTCAATGATAAAACCAT
CGCTTGGGATCGTACCTCCGATAACTCTGCAGGCACCAATGGTGTCAATAATGGAGGTGTGTGGACCTGCTCCTCCACCG
TCACCTCCGATGCACTGAGACCTTCCGGCTGCATTGCCTCTAAATAA
ATGAAAAAGCAACAAGGTTTTAACTTAATCGAACTAATGATCGTCATTGCAATCATTGCTGTCCTAGCAGCCATCGCGCT
GCCTATGTACCAAAATTATGTCGCCAGATCCCAACTCACCGCGGCACTGGCCGACATCACGCCGGGCAAAGTGCAAGCCG
AGTCTCTGATTGCTGATGGGAAGAGTACATCCAACGCGAGTGATATTGGTCTGCGTACCGACACCACTCGTTGTGGGATT
ACCGTTAAAGTCGATGCCGCTGGCACTGCCAACATCACATGCAAAGTTAAGGGCAACTCTCAAGTCAATGATAAAACCAT
CGCTTGGGATCGTACCTCCGATAACTCTGCAGGCACCAATGGTGTCAATAATGGAGGTGTGTGGACCTGCTCCTCCACCG
TCACCTCCGATGCACTGAGACCTTCCGGCTGCATTGCCTCTAAATAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilA/pilAI | Pseudomonas stutzeri DSM 10701 |
42.857 |
99.324 |
0.426 |
| pilA | Pseudomonas aeruginosa PAK |
38.994 |
100 |
0.419 |
| pilA/pilAII | Pseudomonas stutzeri DSM 10701 |
42.177 |
99.324 |
0.419 |
| pilA | Vibrio cholerae strain A1552 |
38.71 |
100 |
0.405 |
| pilA | Vibrio cholerae O1 biovar El Tor strain E7946 |
38.71 |
100 |
0.405 |
| pilA | Vibrio cholerae C6706 |
38.71 |
100 |
0.405 |
| pilA | Acinetobacter baumannii strain A118 |
39.333 |
100 |
0.399 |