Detailed information
Bioinformatically predicted
Overview
| Name | comGC/cglC | Type | Machinery gene |
| Locus tag | AOY37_RS01095 | Genome accession | NZ_CP013202 |
| Coordinates | 189416..189745 (+) | Length | 109 a.a. |
| NCBI ID | WP_000793380.1 | Uniprot ID | A0A0E1EKJ1 |
| Organism | Streptococcus agalactiae strain GBS ST-1 | ||
| Function | dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 184416..194745
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| AOY37_RS01080 (AOY37_01080) | - | 186973..187338 (+) | 366 | WP_000285373.1 | DUF1033 family protein | - |
| AOY37_RS01085 (AOY37_01085) | comYA | 187511..188482 (+) | 972 | WP_000250805.1 | competence type IV pilus ATPase ComGA | Machinery gene |
| AOY37_RS01090 (AOY37_01090) | comYB | 188376..189419 (+) | 1044 | WP_223295889.1 | competence type IV pilus assembly protein ComGB | Machinery gene |
| AOY37_RS01095 (AOY37_01095) | comGC/cglC | 189416..189745 (+) | 330 | WP_000793380.1 | competence type IV pilus major pilin ComGC | Machinery gene |
| AOY37_RS01100 (AOY37_01100) | comYD | 189720..190133 (+) | 414 | WP_000244261.1 | competence type IV pilus minor pilin ComGD | Machinery gene |
| AOY37_RS01105 (AOY37_01105) | comGE | 190105..190404 (+) | 300 | WP_000234804.1 | competence type IV pilus minor pilin ComGE | - |
| AOY37_RS01110 (AOY37_01110) | comGF | 190358..190819 (+) | 462 | WP_001878820.1 | competence type IV pilus minor pilin ComGF | - |
| AOY37_RS01115 (AOY37_01115) | comGG | 190797..191168 (+) | 372 | WP_000601104.1 | competence type IV pilus minor pilin ComGG | - |
| AOY37_RS01120 (AOY37_01120) | comYH | 191283..192257 (+) | 975 | WP_001008574.1 | class I SAM-dependent methyltransferase | Machinery gene |
| AOY37_RS01125 (AOY37_01125) | - | 192289..193482 (+) | 1194 | WP_000047534.1 | acetate kinase | - |
| AOY37_RS01130 (AOY37_01130) | - | 193634..193840 (+) | 207 | WP_000798241.1 | helix-turn-helix transcriptional regulator | - |
| AOY37_RS11735 | - | 193899..194036 (+) | 138 | WP_001865900.1 | hypothetical protein | - |
| AOY37_RS01135 (AOY37_01135) | - | 194077..194532 (+) | 456 | WP_000905673.1 | hypothetical protein | - |
Sequence
Protein
Download Length: 109 a.a. Molecular weight: 12129.27 Da Isoelectric Point: 10.0311
>NTDB_id=160587 AOY37_RS01095 WP_000793380.1 189416..189745(+) (comGC/cglC) [Streptococcus agalactiae strain GBS ST-1]
MKNLLLKCKDKKVKAFTLLEMLVVLIIISVLLLLFVPNLSKQKESVTRTGNAAVVKVVESQAELFELQETGRKASLSTLK
SGGYITEKQEKAYLDYYKDSSNGSQKISS
MKNLLLKCKDKKVKAFTLLEMLVVLIIISVLLLLFVPNLSKQKESVTRTGNAAVVKVVESQAELFELQETGRKASLSTLK
SGGYITEKQEKAYLDYYKDSSNGSQKISS
Nucleotide
Download Length: 330 bp
>NTDB_id=160587 AOY37_RS01095 WP_000793380.1 189416..189745(+) (comGC/cglC) [Streptococcus agalactiae strain GBS ST-1]
ATGAAAAATTTATTGTTAAAATGTAAGGATAAGAAGGTTAAAGCATTTACACTTTTAGAAATGTTAGTTGTTTTGATCAT
TATTTCGGTCTTGTTGTTATTGTTTGTACCCAATTTATCAAAACAAAAGGAAAGTGTCACAAGAACTGGAAATGCCGCTG
TTGTCAAGGTTGTAGAAAGTCAAGCCGAACTTTTTGAACTGCAAGAAACAGGTAGAAAAGCTAGTTTATCCACTCTAAAA
TCTGGAGGATATATTACTGAAAAGCAAGAAAAAGCCTATTTAGATTATTATAAAGACAGTTCCAATGGTTCTCAGAAAAT
TTCAAGTTAA
ATGAAAAATTTATTGTTAAAATGTAAGGATAAGAAGGTTAAAGCATTTACACTTTTAGAAATGTTAGTTGTTTTGATCAT
TATTTCGGTCTTGTTGTTATTGTTTGTACCCAATTTATCAAAACAAAAGGAAAGTGTCACAAGAACTGGAAATGCCGCTG
TTGTCAAGGTTGTAGAAAGTCAAGCCGAACTTTTTGAACTGCAAGAAACAGGTAGAAAAGCTAGTTTATCCACTCTAAAA
TCTGGAGGATATATTACTGAAAAGCAAGAAAAAGCCTATTTAGATTATTATAAAGACAGTTCCAATGGTTCTCAGAAAAT
TTCAAGTTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comGC/cglC | Streptococcus mitis NCTC 12261 |
60.55 |
100 |
0.606 |
| comGC/cglC | Streptococcus mitis SK321 |
59.633 |
100 |
0.596 |
| comYC | Streptococcus gordonii str. Challis substr. CH1 |
61.165 |
94.495 |
0.578 |
| comGC/cglC | Streptococcus pneumoniae TIGR4 |
57.798 |
100 |
0.578 |
| comGC/cglC | Streptococcus pneumoniae R6 |
57.798 |
100 |
0.578 |
| comGC/cglC | Streptococcus pneumoniae Rx1 |
57.798 |
100 |
0.578 |
| comGC/cglC | Streptococcus pneumoniae D39 |
57.798 |
100 |
0.578 |
| comYC | Streptococcus mutans UA159 |
55.238 |
96.33 |
0.532 |
| comYC | Streptococcus mutans UA140 |
55.238 |
96.33 |
0.532 |
| comGC | Lactococcus lactis subsp. cremoris KW2 |
63.043 |
84.404 |
0.532 |
| comYC | Streptococcus suis isolate S10 |
65.854 |
75.229 |
0.495 |