Detailed information    

insolico Bioinformatically predicted

Overview

Name   cinA   Type   Machinery gene
Locus tag   AFK25_RS06705 Genome accession   NZ_CP012152
Coordinates   1269070..1270302 (+) Length   410 a.a.
NCBI ID   WP_021094601.1    Uniprot ID   A0AAW7TIY8
Organism   Anoxybacillus gonensis strain G2     
Function   unknown (predicted from homology)   
Unclear

Genomic Context

Location: 1264070..1275302
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  AFK25_RS06675 (AFK25_06695) yfmH 1264276..1265556 (+) 1281 WP_009362685.1 EF-P 5-aminopentanol modification-associated protein YfmH -
  AFK25_RS06680 (AFK25_06700) ymfI 1265563..1266276 (+) 714 WP_009362684.1 elongation factor P 5-aminopentanone reductase -
  AFK25_RS06685 (AFK25_06705) - 1266342..1266590 (+) 249 WP_009362683.1 DUF3243 domain-containing protein -
  AFK25_RS06690 (AFK25_06710) - 1266773..1267564 (+) 792 WP_009362682.1 DUF3388 domain-containing protein -
  AFK25_RS06695 (AFK25_06715) - 1267574..1268440 (+) 867 WP_019418271.1 helix-turn-helix domain-containing protein -
  AFK25_RS06700 (AFK25_06720) pgsA 1268470..1269048 (+) 579 WP_026011787.1 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase -
  AFK25_RS06705 (AFK25_06725) cinA 1269070..1270302 (+) 1233 WP_021094601.1 competence/damage-inducible protein A Machinery gene
  AFK25_RS06710 (AFK25_06730) recA 1270409..1271446 (+) 1038 WP_026011788.1 recombinase RecA Machinery gene
  AFK25_RS06715 (AFK25_06735) rny 1271724..1273280 (+) 1557 WP_009362675.1 ribonuclease Y -
  AFK25_RS06720 (AFK25_06740) - 1273380..1274175 (+) 796 Protein_1302 TIGR00282 family metallophosphoesterase -
  AFK25_RS06725 (AFK25_06745) spoVS 1274302..1274562 (+) 261 WP_003181955.1 stage V sporulation protein SpoVS -

Sequence

Protein


Download         Length: 410 a.a.        Molecular weight: 45525.42 Da        Isoelectric Point: 6.4203

>NTDB_id=151911 AFK25_RS06705 WP_021094601.1 1269070..1270302(+) (cinA) [Anoxybacillus gonensis strain G2]
MKAELIAVGSELLLGQIANTNAQFLSQQLAEIGIDVYYHTVVGDNPQRLTHAIEVAKQRSNLIIFTGGLGPTKDDLTKET
IANMLNKSLVLDEEAWRSICDYFSKTKRPMSPNNRKQALVLEGSYVLKNEHGMAPGMAITVDHITYMLLPGPPKEMQPMF
IKYGRPFLLQKRHVREKIVSRVLRFFHIGESQLEAEIEDFIDAQTNPTIAPLASDGEVTLRLTAKHEREEEAKRLIDELE
QNILARVRPYFYGYNDDTLFSKLLATLKENNQTLAVAESLTGGLFLEEMTALPTASTVIAGGVVCYTNEIKENVLHVPKE
ILQTEGAVSERCAQLMAENVRKLCGSDIGISFTGVAGPNELEGKPVGTVWIGIATEQGTKTFGLTLSGGRRAIRMRTAKY
GCYYLLQLLH

Nucleotide


Download         Length: 1233 bp        

>NTDB_id=151911 AFK25_RS06705 WP_021094601.1 1269070..1270302(+) (cinA) [Anoxybacillus gonensis strain G2]
ATGAAAGCAGAACTCATTGCGGTCGGTTCAGAACTTTTACTTGGTCAAATTGCAAATACGAACGCTCAGTTTTTATCGCA
ACAATTAGCTGAAATAGGAATAGATGTGTATTACCATACGGTTGTTGGCGATAACCCTCAAAGGCTTACACATGCGATTG
AAGTAGCGAAGCAACGCTCGAACTTAATCATTTTCACAGGGGGACTTGGTCCGACAAAAGACGATTTAACGAAAGAAACA
ATTGCAAACATGTTAAATAAATCGCTCGTTTTAGATGAAGAAGCATGGCGTTCTATTTGTGATTATTTTTCGAAAACGAA
GCGCCCAATGTCTCCGAACAATCGAAAACAAGCGCTCGTATTGGAAGGAAGTTATGTGTTAAAAAATGAACATGGGATGG
CCCCGGGAATGGCAATAACTGTTGATCACATCACGTACATGCTCCTCCCGGGACCGCCAAAAGAAATGCAACCGATGTTC
ATCAAATATGGACGTCCTTTTTTATTGCAAAAACGTCATGTTCGCGAGAAAATTGTTTCACGTGTTCTCCGTTTTTTTCA
TATCGGTGAATCACAGTTAGAAGCAGAAATTGAGGATTTCATCGATGCTCAAACAAATCCGACGATTGCTCCACTGGCGT
CTGATGGCGAAGTAACTCTTCGCTTAACAGCGAAGCATGAGCGTGAAGAAGAAGCAAAGCGGCTCATTGATGAGTTGGAG
CAAAACATTTTAGCCCGCGTTCGTCCTTACTTTTACGGTTATAATGATGACACGTTGTTTAGCAAATTGTTAGCTACATT
GAAAGAAAACAATCAGACGCTCGCTGTTGCTGAAAGTTTAACGGGAGGTTTATTTTTAGAAGAAATGACAGCACTCCCAA
CGGCTTCTACAGTTATCGCGGGGGGAGTTGTTTGTTATACGAATGAAATAAAGGAAAATGTGCTCCATGTGCCGAAAGAA
ATATTACAAACGGAGGGGGCAGTTAGTGAACGATGTGCGCAGTTGATGGCAGAAAATGTTCGAAAACTTTGTGGAAGCGA
TATCGGTATTAGTTTTACAGGTGTTGCAGGACCGAACGAGTTGGAAGGAAAGCCAGTAGGAACGGTATGGATAGGGATTG
CGACAGAACAAGGGACAAAGACATTTGGCCTTACATTATCAGGCGGACGCCGAGCCATTCGGATGCGTACAGCGAAATAC
GGTTGTTATTATTTGCTGCAATTGCTACATTAA

Domains

Predicted by InterproScan.

Competence-damaged protein (CinA)

(258-408)

Damage-inducible protein CinA KH domain (CinA_KH)

(180-253)

Probable molybdopterin binding domain (MoCF_biosynth)

(5-168)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  cinA Bacillus subtilis subsp. subtilis str. 168

62.5

99.512

0.622
  cinA Streptococcus mitis SK321

49.876

98.293

0.49
  cinA Streptococcus mitis NCTC 12261

49.876

98.293

0.49
  cinA Streptococcus pneumoniae TIGR4

49.876

98.293

0.49
  cinA Streptococcus pneumoniae Rx1

49.127

97.805

0.48
  cinA Streptococcus pneumoniae R6

49.127

97.805

0.48
  cinA Streptococcus pneumoniae D39

48.878

97.805

0.478
  cinA Streptococcus mutans UA159

46.482

97.073

0.451
  cinA Streptococcus suis isolate S10

42.233

100

0.424

Multiple sequence alignment