Detailed information    

insolico Bioinformatically predicted

Overview


Name   kpsS   Type   Regulator
Locus tag   PJ17_RS07435 Genome accession   NZ_CP010306
Coordinates   1446653..1447837 (-) Length   394 a.a.
NCBI ID   WP_042635906.1    Uniprot ID   -
Organism   Campylobacter jejuni subsp. jejuni strain 00-1597     
Function   repress natural transformation (predicted from homology)   
Competence regulation

Genomic Context


Location: 1441653..1452837
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  PJ17_RS07410 (PJ17_07410) fliL 1442801..1443337 (+) 537 WP_002780442.1 flagellar basal body-associated protein FliL -
  PJ17_RS07415 (PJ17_07415) acpS 1443337..1443684 (+) 348 WP_002780441.1 holo-ACP synthase -
  PJ17_RS07420 (PJ17_07420) - 1443685..1444104 (-) 420 WP_002780440.1 hypothetical protein -
  PJ17_RS07425 (PJ17_07425) - 1444101..1445462 (-) 1362 WP_002875992.1 cytochrome P450 -
  PJ17_RS07430 (PJ17_07430) - 1445459..1446580 (-) 1122 WP_002860382.1 hypothetical protein -
  PJ17_RS07435 (PJ17_07435) kpsS 1446653..1447837 (-) 1185 WP_042635906.1 capsule polysaccharide modification protein KpsS Regulator
  PJ17_RS07440 (PJ17_07440) - 1447834..1449732 (-) 1899 Protein_1448 capsular polysaccharide biosynthesis protein -
  PJ17_RS07445 (PJ17_07445) - 1449779..1450501 (-) 723 WP_042635908.1 inositol monophosphatase family protein -
  PJ17_RS07450 (PJ17_07450) - 1450501..1450992 (-) 492 WP_042635909.1 YhcH/YjgK/YiaL family protein -
  PJ17_RS07455 (PJ17_07455) - 1450992..1451924 (-) 933 WP_042635910.1 phosphoglycerate dehydrogenase -
  PJ17_RS07460 (PJ17_07460) - 1451914..1452624 (-) 711 WP_042635911.1 acylneuraminate cytidylyltransferase -

Sequence


Protein


Download         Length: 394 a.a.        Molecular weight: 46742.44 Da        Isoelectric Point: 9.9415

>NTDB_id=136157 PJ17_RS07435 WP_042635906.1 1446653..1447837(-) (kpsS) [Campylobacter jejuni subsp. jejuni strain 00-1597]
MRFSTKIKKEFSGKNVLLLQGPVGNFFHHLAMKMKKNQTKVFKLNFNGGDFFFYPSGTRCKCDEKDLENFYRDFFQSKKI
DAVLMYNDCRIIHAKAIKVAKELGIGIWIFEEGYLRPYCITLEKDGVNANSSLPRDKNFYLSQNIFTKESIKEIPGGFKF
MAFDAFLYWLFAFILAPFFNNKLHHRTLYPFEFLFWFRSLYRKYLYKITEKKLNEKIYNLEKKYFLAILQVYSDTQIKYH
YKKSIEHFIEETILSFANHARAKSYLVFKHHPMDRGYKNYSKLINDLSQKYHVEGRVLYVHDTHLPVLLRKALGCITINS
TVGLSAILEGCPTKVCGNAFYDFEGLSYPKKLQFFWREAHAYKPNPVLVCNFKKYLLQTNQFNGNFYKNFFLDK

Nucleotide


Download         Length: 1185 bp        

>NTDB_id=136157 PJ17_RS07435 WP_042635906.1 1446653..1447837(-) (kpsS) [Campylobacter jejuni subsp. jejuni strain 00-1597]
ATGAGATTTAGCACTAAAATTAAAAAAGAATTTAGCGGTAAAAATGTTTTACTCTTGCAAGGGCCTGTGGGAAATTTTTT
TCATCATCTTGCAATGAAAATGAAAAAAAACCAAACCAAAGTTTTTAAACTCAATTTTAACGGTGGAGATTTTTTTTTCT
ATCCTAGTGGAACGAGGTGTAAGTGCGATGAAAAAGATCTTGAAAATTTCTATAGAGATTTTTTTCAAAGCAAAAAAATC
GATGCTGTTTTAATGTATAATGATTGTCGTATTATCCATGCTAAGGCTATTAAAGTGGCTAAAGAATTAGGAATTGGAAT
ATGGATTTTTGAAGAAGGATATTTAAGGCCTTATTGTATTACTTTGGAAAAAGATGGGGTGAATGCAAATTCTTCTTTAC
CGCGTGATAAAAATTTTTATCTTTCTCAAAATATTTTTACCAAAGAAAGCATAAAAGAAATTCCAGGTGGATTTAAATTT
ATGGCTTTTGATGCTTTTTTGTATTGGTTGTTTGCTTTTATTTTGGCTCCATTTTTTAACAACAAACTTCATCATCGCAC
TTTATATCCTTTTGAATTTTTATTTTGGTTTAGATCATTGTATAGAAAGTATCTTTATAAGATTACAGAAAAAAAACTAA
ATGAAAAGATTTATAATTTAGAAAAAAAGTACTTTTTGGCGATTTTACAAGTTTATAGCGATACGCAAATTAAATATCAT
TACAAAAAAAGCATAGAGCACTTTATAGAGGAAACCATACTTTCTTTTGCAAACCATGCAAGAGCTAAATCTTATCTAGT
TTTTAAACACCATCCCATGGATAGGGGCTATAAGAATTATTCTAAACTCATAAATGATTTAAGTCAAAAATATCATGTAG
AAGGAAGGGTTTTATATGTTCATGATACCCACTTGCCAGTTCTTTTAAGAAAGGCTTTGGGTTGTATTACTATAAATTCA
ACAGTAGGCCTTAGTGCTATTTTAGAAGGCTGTCCGACTAAGGTTTGTGGCAATGCTTTTTATGATTTTGAAGGCTTATC
TTATCCAAAAAAACTTCAATTTTTTTGGCGTGAAGCTCATGCTTATAAACCCAATCCTGTTTTGGTATGTAATTTTAAAA
AATATCTTTTACAAACTAATCAATTCAACGGCAATTTTTATAAAAATTTCTTTTTAGACAAATAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  kpsS Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819

97.97

100

0.98


Multiple sequence alignment