Detailed information NTG0136151

Bioinformatically predicted

Overview

• Name: waaF
• Type: Regulator
• Locus tag: PJ17_RS05870
• Genome accession: NZ_CP010306
• Coordinates: 1142149..1143108 (+)
• Length: 319 a.a.
• NCBI ID: WP_042635877.1
• Uniprot ID: -
• Organism: Campylobacter jejuni subsp. jejuni strain 00-1597
• Function: repress natural transformation (predicted from homology) Competence regulation

Genomic Context

Location: 1137149..1148108

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
PJ17_RS05845 (PJ17_05845)	neuC	1137738..1138862 (+)	1125	WP_002868604.1	UDP-N-acetylglucosamine 2-epimerase	-
PJ17_RS05850 (PJ17_05850)	-	1138855..1139802 (+)	948	WP_042635875.1	glycosyltransferase	-
PJ17_RS05855 (PJ17_05855)	-	1139799..1140464 (+)	666	WP_002935341.1	acylneuraminate cytidylyltransferase family protein	-
PJ17_RS05860 (PJ17_05860)	-	1140588..1141220 (+)	633	WP_042635876.1	CatB-related O-acetyltransferase	-
PJ17_RS05865 (PJ17_05865)	waaV	1141278..1142090 (-)	813	WP_002918295.1	glycosyltransferase family 2 protein	-
PJ17_RS05870 (PJ17_05870)	waaF	1142149..1143108 (+)	960	WP_042635877.1	lipopolysaccharide heptosyltransferase II	Regulator
PJ17_RS05875 (PJ17_05875)	gmhA	1143089..1143649 (-)	561	WP_002876196.1	D-sedoheptulose 7-phosphate isomerase	-
PJ17_RS05880 (PJ17_05880)	rfaE1	1143646..1145031 (-)	1386	WP_042635878.1	D-glycero-beta-D-manno-heptose-7-phosphate kinase	-
PJ17_RS05885 (PJ17_05885)	rfaD	1145024..1145977 (-)	954	WP_002859254.1	ADP-glyceromanno-heptose 6-epimerase	-
PJ17_RS05890 (PJ17_05890)	gmhB	1145978..1146539 (-)	562	Protein_1143	D-glycero-alpha-D-manno-heptose-1,7-bisphosphate 7-phosphatase	-
PJ17_RS05895 (PJ17_05895)	-	1146620..1146922 (+)	303	WP_002852762.1	cytochrome c	-
PJ17_RS05900 (PJ17_05900)	ccoS	1146945..1147151 (-)	207	WP_002852798.1	cbb3-type cytochrome oxidase assembly protein CcoS	-

Sequence

Protein

• Length: 319 a.a.
• Molecular weight: 36698.24 Da
• Isoelectric Point: 10.3311

>NTDB_id=136151 PJ17_RS05870 WP_042635877.1 1142149..1143108(+) (waaF) [Campylobacter jejuni subsp. jejuni strain 00-1597]
MKIFIHLPTWLGDAVMASPALYAIKEHFKNAQFILYGSLVSTALFKEFPNSKIIIENKQSRYKQALSLRKELGKIDLSFT
FRSAFSSKIILHILKTKQRYFFDKNKHKEEHQVLKYLYFIENALSIKAHFKDLKLPFKLKFQNPLVLKNGKKILGLNPGA
SFGSAKRWDASYFAKVALNFSQSHEILIFGAGKAEQELCNEIYQILKEQNIKVKNLCNKTTIKTLCQNIAFCDLFITNDS
GPMHISAVYKVKTVAIFGPTKFTQTSPWQNENAILVHLDLACMPCMQKTCPLKHHKCMKDLKPQRVIEEARNLLKNSHR

Nucleotide

• Length: 960 bp

>NTDB_id=136151 PJ17_RS05870 WP_042635877.1 1142149..1143108(+) (waaF) [Campylobacter jejuni subsp. jejuni strain 00-1597]
ATGAAAATTTTTATACATCTTCCCACTTGGCTGGGCGATGCAGTGATGGCTTCACCTGCTTTATACGCTATAAAAGAACA
TTTTAAAAATGCCCAATTTATCCTTTATGGCTCTTTGGTTTCCACAGCACTTTTTAAAGAATTTCCTAATTCTAAAATCA
TCATAGAAAATAAACAATCTCGCTATAAACAAGCCCTATCTTTACGTAAAGAACTTGGTAAAATCGATCTTAGCTTTACT
TTTAGATCTGCGTTTTCTTCTAAGATTATCTTGCATATTCTTAAAACAAAACAAAGATATTTTTTTGACAAAAACAAGCA
CAAAGAAGAACATCAAGTTTTAAAATACCTTTATTTTATAGAAAACGCACTTAGTATAAAAGCTCATTTTAAAGACTTAA
AGCTTCCCTTTAAGCTAAAATTTCAAAACCCTCTTGTCTTAAAAAATGGTAAAAAAATTCTAGGACTCAACCCTGGTGCA
AGCTTTGGAAGTGCAAAAAGATGGGATGCGAGTTATTTTGCTAAAGTGGCTTTAAATTTCAGCCAAAGTCATGAAATTTT
AATCTTTGGCGCAGGAAAAGCCGAACAAGAACTTTGTAATGAAATTTATCAAATTTTAAAAGAACAAAACATAAAAGTAA
AAAATCTTTGCAATAAAACCACCATCAAAACCCTTTGTCAAAATATCGCTTTTTGCGATCTTTTCATCACAAATGACAGT
GGACCTATGCACATAAGTGCGGTTTATAAGGTAAAAACCGTAGCTATTTTTGGCCCTACGAAATTTACTCAAACTTCACC
TTGGCAAAATGAAAACGCAATATTAGTGCATTTAGATCTAGCTTGTATGCCTTGTATGCAAAAAACCTGCCCTTTAAAAC
ACCACAAATGCATGAAAGATCTAAAGCCTCAAAGGGTTATAGAAGAGGCTAGAAATTTACTTAAAAACTCTCATCGATGA

Domains

Predicted by InterproScan.

• Glycosyltransferase family 9 (heptosyltransferase) (Glyco_transf_9) (95-294)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
waaF	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	94.654	99.687	0.944