Detailed information
Bioinformatically predicted
Overview
| Name | pilA/pilAI | Type | Machinery gene |
| Locus tag | EG09_RS25665 | Genome accession | NZ_CP010555 |
| Coordinates | 5589452..5589916 (+) | Length | 154 a.a. |
| NCBI ID | WP_023129290.1 | Uniprot ID | - |
| Organism | Pseudomonas aeruginosa strain FRD1 | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 5584452..5594916
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| EG09_RS25640 (EG09_25640) | yacG | 5584622..5584822 (-) | 201 | WP_003094656.1 | DNA gyrase inhibitor YacG | - |
| EG09_RS25645 (EG09_25645) | coaE | 5584819..5585430 (-) | 612 | WP_003094654.1 | dephospho-CoA kinase | - |
| EG09_RS25650 (EG09_25650) | pilD | 5585427..5586299 (-) | 873 | WP_015648060.1 | type IV prepilin peptidase/methyltransferase PilD | Machinery gene |
| EG09_RS25655 (EG09_25655) | pilC | 5586300..5587517 (-) | 1218 | WP_015648061.1 | type II secretion system F family protein | Machinery gene |
| EG09_RS25660 (EG09_25660) | pilB | 5587521..5589221 (-) | 1701 | WP_030048379.1 | type IV-A pilus assembly ATPase PilB | Machinery gene |
| EG09_RS25665 (EG09_25665) | pilA/pilAI | 5589452..5589916 (+) | 465 | WP_023129290.1 | pilin | Machinery gene |
| EG09_RS25670 (EG09_25670) | - | 5590074..5591387 (+) | 1314 | WP_015648064.1 | O-antigen ligase family protein | - |
| EG09_RS25680 (EG09_25680) | nadC | 5591568..5592416 (-) | 849 | WP_003116246.1 | carboxylating nicotinate-nucleotide diphosphorylase | - |
Sequence
Protein
Download Length: 154 a.a. Molecular weight: 16148.47 Da Isoelectric Point: 8.9986
>NTDB_id=124125 EG09_RS25665 WP_023129290.1 5589452..5589916(+) (pilA/pilAI) [Pseudomonas aeruginosa strain FRD1]
MKAQKGFTLIELMIVVAIIGILAAIAIPQYQDYTARTQVTRAVSEISALKTAAESAILEGKKLVSNDSPKNDEYDLGFTS
STLLTGDGKGQIKIDKADTATPEISGTLGRSSGKGIAGAVITVKRDDKGVWTCGITGSPTNWKANYAPANCPKS
MKAQKGFTLIELMIVVAIIGILAAIAIPQYQDYTARTQVTRAVSEISALKTAAESAILEGKKLVSNDSPKNDEYDLGFTS
STLLTGDGKGQIKIDKADTATPEISGTLGRSSGKGIAGAVITVKRDDKGVWTCGITGSPTNWKANYAPANCPKS
Nucleotide
Download Length: 465 bp
>NTDB_id=124125 EG09_RS25665 WP_023129290.1 5589452..5589916(+) (pilA/pilAI) [Pseudomonas aeruginosa strain FRD1]
ATGAAAGCTCAGAAGGGTTTTACTCTGATCGAACTGATGATCGTGGTCGCGATCATCGGCATCCTGGCCGCCATTGCCAT
CCCGCAATATCAGGACTACACCGCCCGTACCCAGGTGACCCGTGCCGTGAGTGAAATCAGCGCGCTGAAGACCGCTGCGG
AGTCGGCGATTCTGGAAGGCAAGAAGCTCGTTTCCAACGATTCTCCCAAAAACGATGAGTATGATCTTGGCTTTACCAGT
TCTACTCTGCTTACCGGTGACGGTAAGGGGCAGATCAAGATTGACAAAGCTGATACCGCAACTCCGGAGATTTCTGGTAC
CTTGGGCCGCTCTTCTGGTAAAGGTATTGCTGGCGCTGTCATCACTGTCAAGCGTGATGATAAAGGAGTATGGACCTGCG
GCATCACTGGTTCGCCGACCAACTGGAAAGCCAACTACGCTCCGGCCAATTGCCCGAAATCCTAA
ATGAAAGCTCAGAAGGGTTTTACTCTGATCGAACTGATGATCGTGGTCGCGATCATCGGCATCCTGGCCGCCATTGCCAT
CCCGCAATATCAGGACTACACCGCCCGTACCCAGGTGACCCGTGCCGTGAGTGAAATCAGCGCGCTGAAGACCGCTGCGG
AGTCGGCGATTCTGGAAGGCAAGAAGCTCGTTTCCAACGATTCTCCCAAAAACGATGAGTATGATCTTGGCTTTACCAGT
TCTACTCTGCTTACCGGTGACGGTAAGGGGCAGATCAAGATTGACAAAGCTGATACCGCAACTCCGGAGATTTCTGGTAC
CTTGGGCCGCTCTTCTGGTAAAGGTATTGCTGGCGCTGTCATCACTGTCAAGCGTGATGATAAAGGAGTATGGACCTGCG
GCATCACTGGTTCGCCGACCAACTGGAAAGCCAACTACGCTCCGGCCAATTGCCCGAAATCCTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilA/pilAI | Pseudomonas stutzeri DSM 10701 |
44.516 |
100 |
0.448 |
| pilA | Acinetobacter baumannii strain A118 |
42.857 |
100 |
0.429 |
| pilA | Pseudomonas aeruginosa PAK |
41.139 |
100 |
0.422 |
| pilA | Ralstonia pseudosolanacearum GMI1000 |
37.059 |
100 |
0.409 |
| pilA | Vibrio cholerae O1 biovar El Tor strain E7946 |
39.073 |
98.052 |
0.383 |
| pilA | Vibrio cholerae strain A1552 |
39.073 |
98.052 |
0.383 |
| pilA | Vibrio cholerae C6706 |
39.073 |
98.052 |
0.383 |
| pilA2 | Legionella pneumophila str. Paris |
37.838 |
96.104 |
0.364 |