Detailed information
Bioinformatically predicted
Overview
| Name | comYG | Type | Machinery gene |
| Locus tag | DYB47_RS09855 | Genome accession | NZ_UHFV01000002 |
| Coordinates | 236108..236485 (+) | Length | 125 a.a. |
| NCBI ID | WP_040841664.1 | Uniprot ID | - |
| Organism | Streptococcus macacae NCTC 11558 | ||
| Function | dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 231108..241485
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| DYB47_RS01335 (NCTC11558_00270) | - | 232360..232740 (+) | 381 | WP_003081066.1 | DUF1033 family protein | - |
| DYB47_RS01340 (NCTC11558_00271) | comYA | 232834..233775 (+) | 942 | WP_003079951.1 | competence type IV pilus ATPase ComGA | Machinery gene |
| DYB47_RS01345 (NCTC11558_00272) | comYB | 233699..234742 (+) | 1044 | WP_081479323.1 | competence type IV pilus assembly protein ComGB | Machinery gene |
| DYB47_RS01350 (NCTC11558_00273) | comYC | 234742..235056 (+) | 315 | WP_003080278.1 | competence type IV pilus major pilin ComGC | Machinery gene |
| DYB47_RS01355 (NCTC11558_00274) | comYD | 235043..235462 (+) | 420 | WP_003082165.1 | competence type IV pilus minor pilin ComGD | Machinery gene |
| DYB47_RS01360 | comYE | 235416..235715 (+) | 300 | WP_040841662.1 | competence type IV pilus minor pilin ComGE | Machinery gene |
| DYB47_RS01365 (NCTC11558_00276) | comYF | 235696..236127 (+) | 432 | WP_003079210.1 | competence type IV pilus minor pilin ComGF | Machinery gene |
| DYB47_RS09855 (NCTC11558_00277) | comYG | 236108..236485 (+) | 378 | WP_040841664.1 | competence type IV pilus minor pilin ComGG | Machinery gene |
| DYB47_RS01375 (NCTC11558_00278) | comYH | 236544..237503 (+) | 960 | WP_003080448.1 | class I SAM-dependent methyltransferase | Machinery gene |
| DYB47_RS01380 (NCTC11558_00279) | - | 237558..238754 (+) | 1197 | WP_003081585.1 | acetate kinase | - |
| DYB47_RS01385 (NCTC11558_00280) | - | 238981..239658 (+) | 678 | WP_003080765.1 | CPBP family intramembrane glutamic endopeptidase | - |
| DYB47_RS01390 (NCTC11558_00281) | proC | 239749..240519 (-) | 771 | WP_003080000.1 | pyrroline-5-carboxylate reductase | - |
Sequence
Protein
Download Length: 125 a.a. Molecular weight: 14832.39 Da Isoelectric Point: 10.0978
>NTDB_id=1171346 DYB47_RS09855 WP_040841664.1 236108..236485(+) (comYG) [Streptococcus macacae NCTC 11558]
MLLRKIKAGILLYALLMAAVFSLMLQFYLDRVVATERQNKMQLLSSKSYLIALITRDSVKEHSGQFEFSDGVSHYNIVNG
RLQIDIKMKDDVFYHYHFPYKVKDNQNKIKENKEIKREMERKDIK
MLLRKIKAGILLYALLMAAVFSLMLQFYLDRVVATERQNKMQLLSSKSYLIALITRDSVKEHSGQFEFSDGVSHYNIVNG
RLQIDIKMKDDVFYHYHFPYKVKDNQNKIKENKEIKREMERKDIK
Nucleotide
Download Length: 378 bp
>NTDB_id=1171346 DYB47_RS09855 WP_040841664.1 236108..236485(+) (comYG) [Streptococcus macacae NCTC 11558]
ATGCTTTTGAGGAAAATTAAAGCTGGTATCCTTCTCTATGCTTTACTAATGGCTGCAGTTTTTAGTCTAATGTTACAATT
TTATCTAGATCGTGTTGTTGCTACAGAACGTCAGAATAAGATGCAGCTATTATCCAGTAAATCTTATTTAATTGCTCTCA
TTACACGAGATTCGGTTAAAGAGCACAGTGGGCAATTTGAGTTTTCTGATGGAGTATCTCATTATAATATTGTTAATGGA
CGTCTGCAGATAGATATCAAAATGAAAGATGATGTTTTTTATCACTATCATTTTCCTTATAAAGTAAAAGACAATCAGAA
CAAGATAAAAGAAAATAAAGAGATAAAAAGAGAAATGGAAAGAAAAGATATAAAATAA
ATGCTTTTGAGGAAAATTAAAGCTGGTATCCTTCTCTATGCTTTACTAATGGCTGCAGTTTTTAGTCTAATGTTACAATT
TTATCTAGATCGTGTTGTTGCTACAGAACGTCAGAATAAGATGCAGCTATTATCCAGTAAATCTTATTTAATTGCTCTCA
TTACACGAGATTCGGTTAAAGAGCACAGTGGGCAATTTGAGTTTTCTGATGGAGTATCTCATTATAATATTGTTAATGGA
CGTCTGCAGATAGATATCAAAATGAAAGATGATGTTTTTTATCACTATCATTTTCCTTATAAAGTAAAAGACAATCAGAA
CAAGATAAAAGAAAATAAAGAGATAAAAAGAGAAATGGAAAGAAAAGATATAAAATAA
Domains
No domain identified.
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comYG | Streptococcus mutans UA140 |
46.875 |
100 |
0.48 |
| comYG | Streptococcus mutans UA159 |
46.875 |
100 |
0.48 |