Detailed information NTG1170452

Bioinformatically predicted

Overview

• Name: ssbA
• Type: Machinery gene
• Locus tag: ACLV7W_RS07340
• Genome accession: NZ_OZ217346
• Coordinates: 1516113..1516583 (-)
• Length: 156 a.a.
• NCBI ID: WP_000609606.1
• Uniprot ID: A0A0U0CT68
• Organism: Streptococcus mitis isolate S. mitis D22
• Function: ssDNA binding (predicted from homology) DNA processing

Genomic Context

Location: 1511113..1521583

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ACLV7W_RS07305 (SMID22_15090)	-	1511126..1512061 (-)	936	WP_000036046.1	manganese-dependent inorganic pyrophosphatase	-
ACLV7W_RS07310 (SMID22_15100)	-	1512144..1512431 (-)	288	WP_411865706.1	GIY-YIG nuclease family protein	-
ACLV7W_RS07315 (SMID22_15110)	-	1512421..1513170 (-)	750	WP_000390769.1	tRNA1(Val) (adenine(37)-N6)-methyltransferase	-
ACLV7W_RS07320 (SMID22_15120)	-	1513223..1513585 (-)	363	WP_000689605.1	S1 RNA-binding domain-containing protein	-
ACLV7W_RS07325 (SMID22_15130)	-	1513587..1514987 (-)	1401	WP_265495462.1	bifunctional Cof-type HAD-IIB family hydrolase/peptidylprolyl isomerase	-
ACLV7W_RS07330 (SMID22_15140)	-	1515067..1515570 (-)	504	WP_049493270.1	GNAT family N-acetyltransferase	-
ACLV7W_RS07335 (SMID22_15150)	rpsR	1515842..1516081 (-)	240	WP_000068664.1	30S ribosomal protein S18	-
ACLV7W_RS07340 (SMID22_15160)	ssbA	1516113..1516583 (-)	471	WP_000609606.1	single-stranded DNA-binding protein SsbA	Machinery gene
ACLV7W_RS07345 (SMID22_15170)	rpsF	1516595..1516885 (-)	291	WP_084923323.1	30S ribosomal protein S6	-
ACLV7W_RS07350 (SMID22_15180)	-	1517244..1517798 (-)	555	WP_411865707.1	DJ-1 family glyoxalase III	-
ACLV7W_RS07355 (SMID22_15190)	-	1517809..1519032 (-)	1224	WP_000830666.1	FtsW/RodA/SpoVE family cell cycle protein	-
ACLV7W_RS07360 (SMID22_15200)	-	1519069..1521519 (-)	2451	WP_411865708.1	bifunctional DnaQ family exonuclease/ATP-dependent helicase	-

Sequence

Protein

• Length: 156 a.a.
• Molecular weight: 17352.20 Da
• Isoelectric Point: 4.9164

>NTDB_id=1170452 ACLV7W_RS07340 WP_000609606.1 1516113..1516583(-) (ssbA) [Streptococcus mitis isolate S. mitis D22]
MINNVVLVGRMTRDAELRYTPSNVAVATFTLAVNRTFKSQNGEREADFINVVMWRQQAENLANWAKKGSLIGVTGRIQTR
SYDNQQGQRVYVTEVVAENFQMLESRSVREGHTGGAYSAPTANYSAPTNSVPDFSRDENPFGATNPLDISDDDLPF

Nucleotide

• Length: 471 bp

>NTDB_id=1170452 ACLV7W_RS07340 WP_000609606.1 1516113..1516583(-) (ssbA) [Streptococcus mitis isolate S. mitis D22]
ATGATTAACAATGTTGTACTTGTAGGGCGTATGACACGTGACGCTGAGTTACGTTATACCCCATCAAATGTAGCAGTTGC
GACTTTTACTCTTGCAGTAAACCGTACATTTAAGAGTCAAAATGGCGAACGTGAGGCTGATTTTATCAATGTCGTTATGT
GGCGCCAACAGGCTGAGAACCTTGCTAACTGGGCTAAAAAAGGCTCACTTATCGGGGTGACAGGTCGTATCCAGACTCGT
AGTTACGATAACCAGCAAGGACAACGTGTCTACGTGACAGAGGTCGTGGCTGAGAATTTCCAAATGTTGGAAAGCCGTAG
TGTGCGTGAGGGTCATACAGGTGGAGCTTACTCTGCACCAACTGCAAACTATTCAGCGCCTACAAATTCAGTACCAGACT
TTTCACGTGATGAAAATCCATTTGGAGCAACAAATCCATTGGATATTTCAGATGATGATTTACCATTCTAA

Domains

Predicted by InterproScan.

• Single-strand binding protein family (SSB) (2-103)

3D structure

• AlphaFold DB: A0A0U0CT68

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
ssbA	Bacillus subtilis subsp. subtilis str. 168	55.233	100	0.609
ssb	Latilactobacillus sakei subsp. sakei 23K	53.409	100	0.603
ssbB/cilA	Streptococcus pneumoniae TIGR4	51.282	75	0.385
ssbB	Bacillus subtilis subsp. subtilis str. 168	55.66	67.949	0.378
ssbB/cilA	Streptococcus pneumoniae R6	50.427	75	0.378
ssbB/cilA	Streptococcus mitis SK321	50.427	75	0.378
ssbB/cilA	Streptococcus mitis NCTC 12261	50.427	75	0.378
ssbB/cilA	Streptococcus pneumoniae Rx1	50.427	75	0.378
ssbB/cilA	Streptococcus pneumoniae D39	50.427	75	0.378
ssbB	Streptococcus sobrinus strain NIDR 6715-7	54.128	69.872	0.378