Detailed information    

insolico Bioinformatically predicted

Overview


Name   comEA/celA/cilE   Type   Machinery gene
Locus tag   ACLV7Z_RS06665 Genome accession   NZ_OZ217343
Coordinates   1302292..1302942 (-) Length   216 a.a.
NCBI ID   WP_218773950.1    Uniprot ID   -
Organism   Streptococcus mitis isolate S. mitis G22     
Function   dsDNA binding to the cell surface (predicted from homology)   
DNA binding and uptake

Genomic Context


Location: 1297292..1307942
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACLV7Z_RS06645 (SMIG22_13030) - 1297893..1299077 (-) 1185 WP_218773953.1 hypothetical protein -
  ACLV7Z_RS06650 (SMIG22_13040) - 1299081..1299668 (-) 588 WP_176139747.1 ABC transporter ATP-binding protein -
  ACLV7Z_RS06655 - 1299701..1299889 (-) 189 WP_218773952.1 hypothetical protein -
  ACLV7Z_RS06660 (SMIG22_13050) comEC/celB 1300068..1302308 (-) 2241 WP_218773951.1 DNA internalization-related competence protein ComEC/Rec2 Machinery gene
  ACLV7Z_RS06665 (SMIG22_13060) comEA/celA/cilE 1302292..1302942 (-) 651 WP_218773950.1 helix-hairpin-helix domain-containing protein Machinery gene
  ACLV7Z_RS06670 (SMIG22_13070) - 1303008..1303577 (-) 570 WP_218773949.1 GNAT family N-acetyltransferase -
  ACLV7Z_RS06675 (SMIG22_13080) - 1303685..1304689 (-) 1005 WP_218773948.1 PhoH family protein -
  ACLV7Z_RS06680 (SMIG22_13090) - 1304775..1304990 (-) 216 WP_001232084.1 YozE family protein -
  ACLV7Z_RS06685 (SMIG22_13100) cvfB 1304999..1305853 (-) 855 WP_001095439.1 RNA-binding virulence regulatory protein CvfB -
  ACLV7Z_RS06690 (SMIG22_13110) frr 1305913..1306470 (-) 558 WP_001262225.1 ribosome recycling factor -
  ACLV7Z_RS06695 (SMIG22_13120) pyrH 1306478..1307215 (-) 738 WP_031222472.1 UMP kinase -

Sequence


Protein


Download         Length: 216 a.a.        Molecular weight: 23270.70 Da        Isoelectric Point: 6.5093

>NTDB_id=1170214 ACLV7Z_RS06665 WP_218773950.1 1302292..1302942(-) (comEA/celA/cilE) [Streptococcus mitis isolate S. mitis G22]
MEAIIEKIKEYKIIVICTALGLLVGGFFLLKPAPHTPVKETNLQAEVVAVSKDSLIEKEVKKEEKEEPVEQDLITVDIKG
AVKSPGIYDLPVGSRVNDAVQKAGGLTEQADSKSLNLAQKVSDEALVYVPTKGEEAASQQTASGTASSTSKEKKVNLNKA
SLEEIKQVKGLGGKRAQDIIDHREANGKFKSVDELKKVSGIGAKTIEKLKDYVTVD

Nucleotide


Download         Length: 651 bp        

>NTDB_id=1170214 ACLV7Z_RS06665 WP_218773950.1 1302292..1302942(-) (comEA/celA/cilE) [Streptococcus mitis isolate S. mitis G22]
ATGGAAGCAATTATCGAGAAAATCAAAGAGTATAAAATCATCGTCATCTGTACTGCTTTAGGCTTGCTTGTAGGAGGATT
TTTCCTGCTAAAGCCAGCTCCACACACACCTGTCAAAGAAACGAATTTGCAGGCAGAAGTTGTAGCAGTTTCAAAGGATT
CATTAATTGAAAAGGAAGTGAAGAAGGAAGAAAAGGAAGAACCGGTTGAACAAGACCTAATCACAGTAGATATCAAAGGT
GCTGTCAAATCGCCAGGGATTTATGATTTGCCAGTAGGTAGTCGGGTCAATGATGCCGTTCAAAAGGCGGGTGGCTTGAC
AGAGCAAGCAGACAGCAAGTCGCTCAATCTAGCTCAGAAAGTCAGTGATGAGGCTCTGGTTTACGTTCCAACTAAGGGAG
AAGAAGCAGCTAGTCAACAGACTGCTTCTGGGACGGCCTCTTCAACAAGCAAGGAAAAGAAGGTCAATCTCAACAAGGCC
AGTCTGGAAGAGATTAAACAGGTCAAAGGATTAGGTGGCAAACGAGCTCAGGACATTATTGACCATCGTGAGGCAAATGG
GAAATTCAAGTCGGTTGATGAACTTAAGAAGGTCTCTGGCATTGGTGCTAAAACGATAGAAAAGTTAAAAGACTATGTTA
CAGTGGATTAA

Domains


Predicted by InterproScan.

(151-214)

(76-126)


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comEA/celA/cilE Streptococcus mitis NCTC 12261

95.37

100

0.954

  comEA/celA/cilE Streptococcus pneumoniae TIGR4

94.907

100

0.949

  comEA/celA/cilE Streptococcus pneumoniae Rx1

93.056

100

0.931

  comEA/celA/cilE Streptococcus pneumoniae D39

93.056

100

0.931

  comEA/celA/cilE Streptococcus pneumoniae R6

93.056

100

0.931

  comEA/celA/cilE Streptococcus mitis SK321

92.593

100

0.926

  comEA Lactococcus lactis subsp. cremoris KW2

41.333

100

0.431

  comEA Streptococcus thermophilus LMD-9

37.391

100

0.398

  comEA Bacillus subtilis subsp. subtilis str. 168

39.216

94.444

0.37

  comEA Latilactobacillus sakei subsp. sakei 23K

33.193

100

0.366


Multiple sequence alignment