Detailed information    

insolico Bioinformatically predicted

Overview


Name   comEC/celB   Type   Machinery gene
Locus tag   ACLV7Z_RS06660 Genome accession   NZ_OZ217343
Coordinates   1300068..1302308 (-) Length   746 a.a.
NCBI ID   WP_218773951.1    Uniprot ID   -
Organism   Streptococcus mitis isolate S. mitis G22     
Function   ssDNA transport into the cell (predicted from homology)   
DNA binding and uptake

Genomic Context


Location: 1295068..1307308
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACLV7Z_RS06625 (SMIG22_12980) - 1295972..1296352 (-) 381 WP_218773954.1 VOC family protein -
  ACLV7Z_RS06630 (SMIG22_12990) rplT 1296411..1296770 (-) 360 WP_000124834.1 50S ribosomal protein L20 -
  ACLV7Z_RS06635 (SMIG22_13000) rpmI 1296822..1297022 (-) 201 WP_001125943.1 50S ribosomal protein L35 -
  ACLV7Z_RS06640 (SMIG22_13010) infC 1297055..1297585 (-) 531 WP_000848180.1 translation initiation factor IF-3 -
  ACLV7Z_RS06645 (SMIG22_13030) - 1297893..1299077 (-) 1185 WP_218773953.1 hypothetical protein -
  ACLV7Z_RS06650 (SMIG22_13040) - 1299081..1299668 (-) 588 WP_176139747.1 ABC transporter ATP-binding protein -
  ACLV7Z_RS06655 - 1299701..1299889 (-) 189 WP_218773952.1 hypothetical protein -
  ACLV7Z_RS06660 (SMIG22_13050) comEC/celB 1300068..1302308 (-) 2241 WP_218773951.1 DNA internalization-related competence protein ComEC/Rec2 Machinery gene
  ACLV7Z_RS06665 (SMIG22_13060) comEA/celA/cilE 1302292..1302942 (-) 651 WP_218773950.1 helix-hairpin-helix domain-containing protein Machinery gene
  ACLV7Z_RS06670 (SMIG22_13070) - 1303008..1303577 (-) 570 WP_218773949.1 GNAT family N-acetyltransferase -
  ACLV7Z_RS06675 (SMIG22_13080) - 1303685..1304689 (-) 1005 WP_218773948.1 PhoH family protein -
  ACLV7Z_RS06680 (SMIG22_13090) - 1304775..1304990 (-) 216 WP_001232084.1 YozE family protein -
  ACLV7Z_RS06685 (SMIG22_13100) cvfB 1304999..1305853 (-) 855 WP_001095439.1 RNA-binding virulence regulatory protein CvfB -
  ACLV7Z_RS06690 (SMIG22_13110) frr 1305913..1306470 (-) 558 WP_001262225.1 ribosome recycling factor -
  ACLV7Z_RS06695 (SMIG22_13120) pyrH 1306478..1307215 (-) 738 WP_031222472.1 UMP kinase -

Sequence


Protein


Download         Length: 746 a.a.        Molecular weight: 84882.31 Da        Isoelectric Point: 9.3680

>NTDB_id=1170213 ACLV7Z_RS06660 WP_218773951.1 1300068..1302308(-) (comEC/celB) [Streptococcus mitis isolate S. mitis G22]
MLQWIKNFPLPLIYLSFLLLWLYYAIFSASYLALLGFVFLIVCLFFQFPWKSAGKVLMICGVFGFWFLFQNWQQSRASQN
LADSVERVRILPDTIKVNGDSLSFRGKSDGRIFQVYYKLQSEEEKEAFQALTDLYDLELEGKLSEPEGQRNFGGFDYQVY
LKTQGIYKTLNIKRIQSLKQVRSWDIGENLSSLRRKSVVWIKTHFPDPMRNYMTGLLLGHLDTDFEEMNELYSSLGIIHL
FALSGMQVGFFMDGFKKLLLRLGLTQEKLKWLIYPFSLIYAGLTGFSASVIRSLLQKLLAQHGVKGLDNFALTVLVLFII
MPNFFLTAGGVLSCAYAFILTMTSKEGEGLKAVARESLVISLGILPILSFYFAEFQPWSILLTFVFSFLFDLVFLPLLSI
LFSLSFLYPVIQLNFIFEWLEGMIRLVSQMTSRPFVFGQPNAWFLILLLISLALVYDLRKNIKRLAVLSLLITGLFFLTK
HPLENEITMLDVGQGESIFLRDVTGKSILIDVGGKVESDKKIEAWQEKATTSNAQRSLIPYLKSRGVAKIDQLILTNTDK
EHVGDLLEVTKAFHVGEILVSKGSLKQKEFVAELEATKTKVRSVTVGENLPIFGSQLEVLSPRKIGDGGHEDSLILYGKL
LDKHFLFTGNLEEKGEKDMLKQYPDLEVDVLKASQHGSKKSSSSAFLEQLKPEMTLISVGKNNRTKLPHQETLTRLEGIN
SKVYRTDQQGAIRFKGWNSWKIESVR

Nucleotide


Download         Length: 2241 bp        

>NTDB_id=1170213 ACLV7Z_RS06660 WP_218773951.1 1300068..1302308(-) (comEC/celB) [Streptococcus mitis isolate S. mitis G22]
ATGTTACAGTGGATTAAGAATTTCCCCCTTCCCCTAATCTATCTGAGTTTTCTGTTACTTTGGCTTTATTACGCTATTTT
CTCAGCATCCTATCTTGCTTTGTTGGGCTTTGTTTTTCTGATTGTCTGTCTCTTTTTCCAATTTCCTTGGAAATCTGCGG
GCAAAGTTCTAATGATTTGTGGAGTCTTTGGATTCTGGTTTCTGTTTCAAAATTGGCAACAGAGTCGAGCGAGTCAAAAT
TTGGCGGATTCTGTTGAAAGGGTACGGATTTTACCAGACACTATTAAGGTCAATGGTGACAGTCTATCCTTTCGTGGCAA
GTCTGATGGACGCATTTTTCAAGTCTATTATAAACTCCAGTCCGAGGAGGAGAAAGAAGCCTTTCAAGCTTTAACAGATC
TTTATGACTTGGAACTAGAAGGAAAACTTTCGGAGCCAGAGGGGCAGAGGAATTTTGGTGGCTTTGACTACCAAGTCTAT
CTGAAGACTCAGGGAATTTACAAGACTCTCAATATAAAAAGAATCCAGTCACTTAAACAAGTTCGCAGTTGGGATATAGG
TGAAAACCTGTCCAGTTTACGTCGAAAGTCTGTGGTTTGGATTAAGACGCACTTTCCAGACCCTATGCGAAATTATATGA
CAGGGCTCTTGTTAGGACATTTGGACACTGACTTTGAGGAGATGAATGAGCTTTATTCTAGTCTAGGAATTATCCACCTT
TTTGCCTTGTCGGGTATGCAGGTAGGCTTTTTCATGGATGGATTTAAGAAACTTCTCTTGCGATTGGGCTTGACCCAAGA
AAAGTTGAAATGGCTGATTTATCCCTTTTCCCTTATCTATGCAGGGCTGACAGGATTTTCAGCATCGGTTATTCGCAGTC
TCTTGCAGAAGCTACTGGCTCAACATGGTGTTAAGGGCTTGGATAATTTTGCCTTGACTGTGCTTGTACTCTTTATTATC
ATGCCCAACTTTTTCCTGACTGCAGGAGGAGTTTTGTCATGTGCTTATGCTTTTATCTTGACTATGACTAGCAAAGAAGG
GGAGGGGCTCAAGGCTGTTGCTAGAGAAAGTCTGGTTATTTCTTTGGGAATATTACCCATTCTATCCTTCTATTTTGCGG
AATTTCAACCTTGGTCCATCCTCTTGACCTTTGTCTTTTCCTTTCTATTTGATTTGGTCTTCTTACCGCTCTTGTCTATC
TTATTTTCCCTTTCCTTTCTCTATCCAGTCATTCAACTGAATTTTATCTTTGAATGGTTGGAGGGAATGATTCGCTTGGT
CTCGCAGATGACAAGTAGGCCGTTTGTCTTTGGACAACCTAATGCATGGTTTTTAATTTTATTGTTAATTTCCTTGGCTT
TGGTCTATGATTTGAGGAAAAACATTAAAAGGCTAGCAGTATTGAGTTTATTAATTACAGGTCTCTTTTTCCTGACCAAA
CATCCACTGGAAAATGAAATTACCATGCTGGATGTTGGGCAAGGCGAAAGTATTTTCCTACGGGATGTAACTGGTAAGAG
CATTCTCATAGATGTCGGTGGCAAGGTAGAATCTGATAAGAAAATTGAGGCTTGGCAAGAAAAGGCGACGACCAGCAATG
CCCAGCGAAGCTTGATACCCTATCTTAAAAGTCGAGGAGTAGCCAAGATTGACCAGCTAATTTTGACCAACACGGACAAG
GAACATGTTGGAGATTTGTTGGAGGTGACCAAGGCTTTTCATGTAGGGGAGATTTTAGTGTCCAAAGGCAGTTTGAAACA
GAAGGAATTTGTTGCAGAACTAGAGGCTACTAAAACAAAGGTGCGCAGTGTGACAGTTGGAGAGAACTTGCCAATTTTCG
GAAGTCAGTTAGAAGTCCTATCTCCAAGGAAAATTGGAGACGGAGGTCATGAAGATTCCCTGATTTTGTATGGGAAACTC
TTGGATAAGCACTTTCTCTTCACAGGAAATTTGGAGGAGAAAGGAGAGAAGGACATGCTGAAGCAATATCCTGACCTAGA
GGTGGATGTTTTGAAAGCTAGCCAACATGGCTCTAAAAAATCATCAAGTTCAGCCTTTTTAGAACAGCTCAAACCAGAGA
TGACTCTCATCTCAGTTGGAAAGAACAATCGAACGAAACTCCCCCATCAGGAAACTTTGACACGACTGGAAGGTATCAAT
AGCAAAGTTTACCGAACTGACCAGCAAGGAGCTATACGGTTTAAAGGTTGGAATAGTTGGAAAATCGAAAGCGTTCGATA
G


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comEC/celB Streptococcus mitis SK321

93.164

100

0.932

  comEC/celB Streptococcus mitis NCTC 12261

91.812

99.866

0.917

  comEC/celB Streptococcus pneumoniae Rx1

90.483

100

0.905

  comEC/celB Streptococcus pneumoniae D39

90.483

100

0.905

  comEC/celB Streptococcus pneumoniae R6

90.483

100

0.905

  comEC/celB Streptococcus pneumoniae TIGR4

90.483

100

0.905

  comEC Lactococcus lactis subsp. cremoris KW2

45.479

99.33

0.452


Multiple sequence alignment