Detailed information NTG1170116

Bioinformatically predicted

Overview

• Name: ssbA
• Type: Machinery gene
• Locus tag: ACLV65_RS03470
• Genome accession: NZ_OZ217342
• Coordinates: 666954..667424 (+)
• Length: 156 a.a.
• NCBI ID: WP_000609606.1
• Uniprot ID: A0A0U0CT68
• Organism: Streptococcus mitis isolate S. mitis B22
• Function: ssDNA binding (predicted from homology) DNA processing

Genomic Context

Location: 661954..672424

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ACLV65_RS03445 (SMIB22_06720)	-	663107..663595 (+)	489	WP_411864530.1	DUF5590 domain-containing protein	-
ACLV65_RS03450 (SMIB22_06730)	-	663592..664779 (+)	1188	WP_411864531.1	pyridoxal phosphate-dependent aminotransferase	-
ACLV65_RS03455 (SMIB22_06740)	-	664772..665137 (+)	366	WP_000565231.1	VOC family protein	-
ACLV65_RS03460 (SMIB22_06750)	asnS	665156..666499 (+)	1344	WP_411864532.1	asparagine--tRNA ligase	-
ACLV65_RS03465 (SMIB22_06760)	rpsF	666652..666942 (+)	291	WP_001151785.1	30S ribosomal protein S6	-
ACLV65_RS03470 (SMIB22_06770)	ssbA	666954..667424 (+)	471	WP_000609606.1	single-stranded DNA-binding protein SsbA	Machinery gene
ACLV65_RS03475 (SMIB22_06780)	rpsR	667456..667695 (+)	240	WP_000068664.1	30S ribosomal protein S18	-
ACLV65_RS03480 (SMIB22_06790)	-	667891..668394 (+)	504	WP_411864533.1	GNAT family N-acetyltransferase	-
ACLV65_RS03485 (SMIB22_06800)	-	668476..669876 (+)	1401	WP_411864534.1	bifunctional Cof-type HAD-IIB family hydrolase/peptidylprolyl isomerase	-
ACLV65_RS03490 (SMIB22_06810)	-	669878..670237 (+)	360	WP_000689593.1	S1 RNA-binding domain-containing protein	-
ACLV65_RS03495 (SMIB22_06820)	-	670291..671040 (+)	750	WP_000390778.1	tRNA1(Val) (adenine(37)-N6)-methyltransferase	-
ACLV65_RS03500 (SMIB22_06830)	-	671030..671314 (+)	285	WP_176138920.1	GIY-YIG nuclease family protein	-
ACLV65_RS03505 (SMIB22_06840)	-	671400..672335 (+)	936	WP_000036054.1	manganese-dependent inorganic pyrophosphatase	-

Sequence

Protein

• Length: 156 a.a.
• Molecular weight: 17352.20 Da
• Isoelectric Point: 4.9164

>NTDB_id=1170116 ACLV65_RS03470 WP_000609606.1 666954..667424(+) (ssbA) [Streptococcus mitis isolate S. mitis B22]
MINNVVLVGRMTRDAELRYTPSNVAVATFTLAVNRTFKSQNGEREADFINVVMWRQQAENLANWAKKGSLIGVTGRIQTR
SYDNQQGQRVYVTEVVAENFQMLESRSVREGHTGGAYSAPTANYSAPTNSVPDFSRDENPFGATNPLDISDDDLPF

Nucleotide

• Length: 471 bp

>NTDB_id=1170116 ACLV65_RS03470 WP_000609606.1 666954..667424(+) (ssbA) [Streptococcus mitis isolate S. mitis B22]
ATGATTAACAATGTTGTACTTGTAGGGCGCATGACACGTGACGCTGAGTTGCGTTATACCCCATCAAATGTAGCAGTTGC
GACTTTTACTCTTGCAGTAAACCGTACATTTAAGAGTCAAAATGGCGAACGTGAGGCTGATTTTATCAATGTCGTTATGT
GGCGCCAACAGGCTGAAAACCTTGCTAATTGGGCTAAAAAAGGCTCACTTATCGGGGTGACAGGTCGTATCCAGACTCGT
AGTTACGATAACCAGCAAGGACAACGTGTCTACGTGACAGAGGTCGTGGCAGAGAATTTCCAAATGTTGGAAAGCCGTAG
TGTGCGTGAAGGTCATACAGGTGGAGCTTACTCTGCCCCAACTGCAAACTATTCAGCACCTACAAATTCAGTACCAGACT
TTTCACGTGATGAAAATCCATTTGGAGCAACAAATCCATTGGATATTTCAGATGATGATTTACCATTCTAA

Domains

Predicted by InterproScan.

• Single-strand binding protein family (SSB) (2-103)

3D structure

• AlphaFold DB: A0A0U0CT68

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
ssbA	Bacillus subtilis subsp. subtilis str. 168	55.233	100	0.609
ssb	Latilactobacillus sakei subsp. sakei 23K	53.409	100	0.603
ssbB/cilA	Streptococcus pneumoniae TIGR4	51.282	75	0.385
ssbB	Bacillus subtilis subsp. subtilis str. 168	55.66	67.949	0.378
ssbB/cilA	Streptococcus pneumoniae R6	50.427	75	0.378
ssbB/cilA	Streptococcus mitis SK321	50.427	75	0.378
ssbB/cilA	Streptococcus mitis NCTC 12261	50.427	75	0.378
ssbB/cilA	Streptococcus pneumoniae Rx1	50.427	75	0.378
ssbB/cilA	Streptococcus pneumoniae D39	50.427	75	0.378
ssbB	Streptococcus sobrinus strain NIDR 6715-7	54.128	69.872	0.378