Detailed information    

insolico Bioinformatically predicted

Overview


Name   htrA   Type   Regulator
Locus tag   ACLV7Q_RS10235 Genome accession   NZ_OZ217341
Coordinates   2139715..2140896 (+) Length   393 a.a.
NCBI ID   WP_176139267.1    Uniprot ID   -
Organism   Streptococcus mitis isolate S. mitis C22     
Function   repress competence development (predicted from homology)   
Competence regulation

Genomic Context


Location: 2134715..2145896
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACLV7Q_RS10195 (SMIC22_20170) - 2135764..2136306 (+) 543 WP_057488235.1 TetR/AcrR family transcriptional regulator -
  ACLV7Q_RS10210 (SMIC22_20200) comE 2136549..2137301 (-) 753 WP_000866065.1 competence system response regulator transcription factor ComE Regulator
  ACLV7Q_RS10215 (SMIC22_20210) comD/comD1 2137298..2138623 (-) 1326 WP_218757900.1 GHKL domain-containing protein Regulator
  ACLV7Q_RS10220 (SMIC22_20220) comC/comC1 2138644..2138769 (-) 126 WP_218757899.1 competence-stimulating peptide ComC Regulator
  ACLV7Q_RS10230 (SMIC22_20240) rlmH 2139052..2139531 (-) 480 WP_084367488.1 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH -
  ACLV7Q_RS10235 (SMIC22_20250) htrA 2139715..2140896 (+) 1182 WP_176139267.1 S1C family serine protease Regulator
  ACLV7Q_RS10240 (SMIC22_20260) spo0J 2140954..2141712 (+) 759 WP_218757898.1 ParB/RepB/Spo0J family partition protein Regulator

Sequence


Protein


Download         Length: 393 a.a.        Molecular weight: 41645.46 Da        Isoelectric Point: 6.1486

>NTDB_id=1170077 ACLV7Q_RS10235 WP_176139267.1 2139715..2140896(+) (htrA) [Streptococcus mitis isolate S. mitis C22]
MKHLKTFYKKGFQLLVVIVISFFSGALGSFSIAQLTQKSSISNSNNNSTITQTAYKNENSTTQAVNKVKDAVVSVITYSA
NRQNSVFGNDETDTDSQQISSEGSGVIYKKNDKEAYIVTNNHVINGASKVDIRLSDGTKVPGEIVGADTFSDIAVVKISS
EKVTTVAEFGDSSKLTVGETAIAIGSPLGSEYANTVTQGIVSSLNRNVSLKSEDGQAISTKAIQTDTAINPGNSGGPLIN
IQGQVIGITSSKIATNGGTSVEGLGFAIPANDAINIIEQLEKNGKVTRPALGIQMVNLSNISTSDIRRLNIPSSVTSGVV
VRSVQSNMPANGHLEKYDVITKVDDKDITSSTDLQSALYNHSIGDTIKITYYRNGKEETTSIKLDKSSGDLES

Nucleotide


Download         Length: 1182 bp        

>NTDB_id=1170077 ACLV7Q_RS10235 WP_176139267.1 2139715..2140896(+) (htrA) [Streptococcus mitis isolate S. mitis C22]
ATGAAACATTTAAAAACATTTTACAAAAAAGGGTTTCAATTATTAGTCGTTATCGTCATTAGCTTTTTTAGTGGAGCCTT
GGGTAGTTTTTCAATAGCTCAACTAACTCAAAAAAGTAGTATAAGCAACTCCAACAATAATAGCACTATCACACAAACTG
CCTATAAGAACGAAAATTCAACAACACAGGCTGTTAATAAAGTAAAAGATGCTGTTGTTTCTGTTATTACTTATTCAGCA
AACAGACAAAATAGCGTATTTGGCAATGATGAGACTGATACAGATTCTCAGCAAATCTCTAGTGAAGGATCGGGAGTTAT
TTATAAAAAGAATGATAAAGAAGCTTACATCGTCACCAATAATCACGTTATAAATGGCGCCAGCAAAGTAGATATTCGAT
TGTCAGATGGGACTAAAGTACCTGGAGAAATCGTCGGAGCGGATACTTTCTCTGATATTGCTGTCGTCAAAATCTCTTCA
GAAAAAGTGACAACAGTAGCTGAGTTTGGTGATTCTAGCAAGTTAACCGTAGGAGAAACTGCTATTGCTATTGGTAGCCC
ATTGGGTTCTGAATATGCAAATACTGTCACTCAAGGTATCGTATCTAGTCTTAATCGAAATGTATCTTTAAAATCTGAAG
ATGGACAAGCCATTTCTACAAAAGCCATCCAAACTGATACTGCTATTAACCCAGGTAACTCTGGTGGCCCACTAATCAAT
ATTCAAGGACAGGTTATCGGAATTACCTCAAGTAAAATTGCCACAAATGGAGGAACATCTGTAGAAGGCCTTGGTTTCGC
AATTCCTGCAAATGATGCTATCAATATTATTGAACAGTTAGAAAAGAACGGAAAAGTGACACGCCCAGCTTTGGGAATCC
AGATGGTTAATTTATCTAATATAAGTACAAGCGACATCAGAAGACTTAATATTCCAAGCAGTGTAACATCTGGTGTAGTT
GTTCGTTCTGTGCAAAGTAATATGCCTGCAAATGGTCACCTTGAAAAATACGATGTTATTACAAAAGTAGATGACAAAGA
CATTACTTCATCAACAGACTTACAAAGTGCTCTTTACAATCATTCTATCGGAGACACCATTAAGATCACTTACTATCGTA
ACGGTAAAGAAGAAACTACATCTATTAAACTTGACAAGAGTTCAGGTGATTTAGAATCTTAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  htrA Streptococcus mitis NCTC 12261

97.71

100

0.977

  htrA Streptococcus pneumoniae D39

96.947

100

0.969

  htrA Streptococcus pneumoniae R6

96.947

100

0.969

  htrA Streptococcus pneumoniae Rx1

96.947

100

0.969

  htrA Streptococcus pneumoniae TIGR4

96.947

100

0.969

  htrA Streptococcus gordonii str. Challis substr. CH1

66.162

100

0.667

  htrA Streptococcus mutans UA159

54.569

100

0.547


Multiple sequence alignment