Detailed information NTG1170035

Bioinformatically predicted

Overview

• Name: ssbA
• Type: Machinery gene
• Locus tag: ACLV7Q_RS03490
• Genome accession: NZ_OZ217341
• Coordinates: 674813..675283 (+)
• Length: 156 a.a.
• NCBI ID: WP_000609606.1
• Uniprot ID: A0A0U0CT68
• Organism: Streptococcus mitis isolate S. mitis C22
• Function: ssDNA binding (predicted from homology) DNA processing

Genomic Context

Location: 669813..680283

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ACLV7Q_RS03465 (SMIC22_06720)	-	670965..671453 (+)	489	WP_218757475.1	DUF5590 domain-containing protein	-
ACLV7Q_RS03470 (SMIC22_06730)	-	671450..672637 (+)	1188	WP_218757476.1	pyridoxal phosphate-dependent aminotransferase	-
ACLV7Q_RS03475 (SMIC22_06740)	-	672630..672995 (+)	366	WP_218757477.1	VOC family protein	-
ACLV7Q_RS03480 (SMIC22_06750)	asnS	673015..674358 (+)	1344	WP_000167160.1	asparagine--tRNA ligase	-
ACLV7Q_RS03485 (SMIC22_06760)	rpsF	674511..674801 (+)	291	WP_001151785.1	30S ribosomal protein S6	-
ACLV7Q_RS03490 (SMIC22_06770)	ssbA	674813..675283 (+)	471	WP_000609606.1	single-stranded DNA-binding protein SsbA	Machinery gene
ACLV7Q_RS03495 (SMIC22_06780)	rpsR	675315..675554 (+)	240	WP_000068664.1	30S ribosomal protein S18	-
ACLV7Q_RS03500 (SMIC22_06790)	-	675798..676301 (+)	504	WP_045607345.1	GNAT family N-acetyltransferase	-
ACLV7Q_RS03505 (SMIC22_06800)	-	676381..677781 (+)	1401	WP_218757478.1	bifunctional Cof-type HAD-IIB family hydrolase/peptidylprolyl isomerase	-
ACLV7Q_RS03510 (SMIC22_06810)	-	677783..678142 (+)	360	WP_000689593.1	S1 RNA-binding domain-containing protein	-
ACLV7Q_RS03515 (SMIC22_06820)	-	678196..678945 (+)	750	WP_033685376.1	tRNA1(Val) (adenine(37)-N6)-methyltransferase	-
ACLV7Q_RS03520 (SMIC22_06830)	-	678935..679222 (+)	288	WP_218757479.1	GIY-YIG nuclease family protein	-
ACLV7Q_RS03525 (SMIC22_06840)	-	679305..680240 (+)	936	WP_218757480.1	manganese-dependent inorganic pyrophosphatase	-

Sequence

Protein

• Length: 156 a.a.
• Molecular weight: 17352.20 Da
• Isoelectric Point: 4.9164

>NTDB_id=1170035 ACLV7Q_RS03490 WP_000609606.1 674813..675283(+) (ssbA) [Streptococcus mitis isolate S. mitis C22]
MINNVVLVGRMTRDAELRYTPSNVAVATFTLAVNRTFKSQNGEREADFINVVMWRQQAENLANWAKKGSLIGVTGRIQTR
SYDNQQGQRVYVTEVVAENFQMLESRSVREGHTGGAYSAPTANYSAPTNSVPDFSRDENPFGATNPLDISDDDLPF

Nucleotide

• Length: 471 bp

>NTDB_id=1170035 ACLV7Q_RS03490 WP_000609606.1 674813..675283(+) (ssbA) [Streptococcus mitis isolate S. mitis C22]
ATGATTAACAATGTTGTACTTGTAGGGCGTATGACACGTGATGCTGAGTTGCGTTATACCCCATCAAATGTAGCAGTTGC
GACTTTTACTCTTGCAGTAAACCGTACATTTAAGAGTCAAAATGGCGAACGTGAGGCTGATTTTATCAATGTCGTTATGT
GGCGCCAACAGGCTGAAAACCTTGCTAACTGGGCTAAAAAAGGCTCACTTATCGGGGTGACAGGTCGTATCCAGACTCGT
AGTTACGATAATCAGCAAGGACAACGTGTCTACGTGACAGAGGTCGTGGCTGAGAATTTCCAAATGTTGGAAAGCCGTAG
TGTGCGTGAGGGTCACACAGGTGGAGCTTATTCTGCACCAACTGCAAACTATTCAGCACCTACAAATTCAGTACCAGACT
TTTCACGTGATGAAAATCCATTTGGAGCAACAAATCCATTGGATATTTCAGATGATGATTTACCATTCTAA

Domains

Predicted by InterproScan.

• Single-strand binding protein family (SSB) (2-103)

3D structure

• AlphaFold DB: A0A0U0CT68

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
ssbA	Bacillus subtilis subsp. subtilis str. 168	55.233	100	0.609
ssb	Latilactobacillus sakei subsp. sakei 23K	53.409	100	0.603
ssbB/cilA	Streptococcus pneumoniae TIGR4	51.282	75	0.385
ssbB	Bacillus subtilis subsp. subtilis str. 168	55.66	67.949	0.378
ssbB/cilA	Streptococcus pneumoniae R6	50.427	75	0.378
ssbB/cilA	Streptococcus mitis SK321	50.427	75	0.378
ssbB/cilA	Streptococcus mitis NCTC 12261	50.427	75	0.378
ssbB/cilA	Streptococcus pneumoniae Rx1	50.427	75	0.378
ssbB/cilA	Streptococcus pneumoniae D39	50.427	75	0.378
ssbB	Streptococcus sobrinus strain NIDR 6715-7	54.128	69.872	0.378