Detailed information NTG1168796

Bioinformatically predicted

Overview

• Name: comGC
• Type: Machinery gene
• Locus tag: ACNUDW_RS04665
• Genome accession: NZ_OZ197080
• Coordinates: 928914..929225 (+)
• Length: 103 a.a.
• NCBI ID: WP_000472256.1
• Uniprot ID: -
• Organism: Staphylococcus aureus isolate 23S00032-1
• Function: dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 923914..934225

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ACNUDW_RS04635	-	924697..924900 (+)	204	WP_000087559.1	YqgQ family protein	-
ACNUDW_RS04640	-	924897..925883 (+)	987	WP_000161315.1	ROK family glucokinase	-
ACNUDW_RS04645	-	925883..926212 (+)	330	WP_001018871.1	MTH1187 family thiamine-binding protein	-
ACNUDW_RS04650	-	926209..926832 (+)	624	WP_001223008.1	MBL fold metallo-hydrolase	-
ACNUDW_RS04655	comGA	926884..927858 (+)	975	WP_000697220.1	competence type IV pilus ATPase ComGA	Machinery gene
ACNUDW_RS04660	comGB	927830..928900 (+)	1071	WP_000776425.1	competence type IV pilus assembly protein ComGB	Machinery gene
ACNUDW_RS04665	comGC	928914..929225 (+)	312	WP_000472256.1	competence type IV pilus major pilin ComGC	Machinery gene
ACNUDW_RS04670	comGD	929203..929649 (+)	447	WP_001796473.1	competence type IV pilus minor pilin ComGD	Machinery gene
ACNUDW_RS04675	comGE	929636..929935 (+)	300	WP_000844413.1	hypothetical protein	Machinery gene
ACNUDW_RS04680	comGF	929853..930350 (+)	498	WP_001825340.1	competence type IV pilus minor pilin ComGF	Machinery gene
ACNUDW_RS04685	-	930541..931712 (+)	1172	Protein_911	IS256-like element IS256 family transposase	-
ACNUDW_RS04690	-	931779..931925 (+)	147	WP_001789879.1	hypothetical protein	-
ACNUDW_RS04695	-	931915..932439 (+)	525	WP_001015120.1	shikimate kinase	-
ACNUDW_RS04700	gcvT	932598..933689 (+)	1092	WP_000093349.1	glycine cleavage system aminomethyltransferase GcvT	-

Sequence

Protein

• Length: 103 a.a.
• Molecular weight: 11315.36 Da
• Isoelectric Point: 8.5268

>NTDB_id=1168796 ACNUDW_RS04665 WP_000472256.1 928914..929225(+) (comGC) [Staphylococcus aureus isolate 23S00032-1]
MFKFLKKTQAFTLIEMLLVLLIISLLLILIIPNIAKQTAHIQSTGCNAQVKMVNSQIEAYALKHNRNPSSIEDLIADGFI
KEAQKTCKSGETITISNGEAVAN

Nucleotide

• Length: 312 bp

>NTDB_id=1168796 ACNUDW_RS04665 WP_000472256.1 928914..929225(+) (comGC) [Staphylococcus aureus isolate 23S00032-1]
ATGTTTAAATTTCTAAAAAAAACTCAAGCGTTTACATTGATAGAGATGCTATTAGTATTATTAATCATCAGTTTATTATT
AATTTTAATCATTCCAAATATTGCTAAACAAACTGCTCACATACAATCAACAGGTTGTAATGCACAGGTAAAAATGGTTA
ATAGTCAAATTGAAGCGTATGCATTGAAACATAATAGAAATCCATCGTCTATTGAAGACTTAATTGCAGATGGTTTTATA
AAAGAAGCACAAAAGACATGTAAATCAGGAGAGACAATAACAATTAGTAATGGAGAAGCAGTTGCAAATTAG

Domains

Predicted by InterproScan.

• Prokaryotic N-terminal methylation motif (N_methyl) (6-30)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comGC	Staphylococcus aureus MW2	100	100	1
comGC	Staphylococcus aureus N315	100	100	1
comGC/cglC	Streptococcus pneumoniae TIGR4	46.078	99.029	0.456
comGC/cglC	Streptococcus pneumoniae Rx1	46.078	99.029	0.456
comGC/cglC	Streptococcus pneumoniae D39	46.078	99.029	0.456
comGC/cglC	Streptococcus pneumoniae R6	46.078	99.029	0.456
comGC/cglC	Streptococcus mitis SK321	51.163	83.495	0.427
comGC/cglC	Streptococcus mitis NCTC 12261	51.163	83.495	0.427
comYC	Streptococcus gordonii str. Challis substr. CH1	42.857	95.146	0.408
comYC	Streptococcus suis isolate S10	50	75.728	0.379
comGC	Bacillus subtilis subsp. subtilis str. 168	41.758	88.35	0.369
comGC	Lactococcus lactis subsp. cremoris KW2	46.341	79.612	0.369