Detailed information NTG1158756

Bioinformatically predicted

Overview

• Name: comE/blpR
• Type: Regulator
• Locus tag: QOR56_RS09370
• Genome accession: NZ_OX460906
• Coordinates: 1884004..1884582 (-)
• Length: 192 a.a.
• NCBI ID: WP_283572268.1
• Uniprot ID: -
• Organism: Streptococcus agalactiae isolate MRI Z2-265
• Function: activate transcription of early competence genes; regulation of comX expression (predicted from homology) Competence regulation

Related MGE

Note: This gene co-localizes with putative mobile genetic elements (MGEs) in the genome predicted by VRprofile2, as detailed below.

Gene-MGE association summary

MGE type	MGE coordinates	Gene coordinates	Relative position	Distance (bp)
IS/Tn	1884644..1885819	1884004..1884582	flank	62

Gene organization within MGE regions

Location: 1884004..1885819

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
QOR56_RS09370	comE/blpR	1884004..1884582 (-)	579	WP_283572268.1	LytTR family DNA-binding domain-containing protein	Regulator
QOR56_RS09375	-	1884644..1885819 (+)	1176	WP_000191687.1	IS256-like element ISSag11 family transposase	-

Sequence

Protein

• Length: 192 a.a.
• Molecular weight: 22743.15 Da
• Isoelectric Point: 8.2382

>NTDB_id=1158756 QOR56_RS09370 WP_283572268.1 1884004..1884582(-) (comE/blpR) [Streptococcus agalactiae isolate MRI Z2-265]
MFTQDILHYLGLEVAKQIRQVDPYAQIVFVTTHSELMPLTFRYQVSALDNIDKGLSQEEFSQRIEEVLLYVDGICNKPLV
ENSFYFKSRYSQVQLPFNDLLYIETSSRSHRVVLYTEKDRMEFTATLGDILKQEPRLFQCHRSFLVNPLNIFKVDRIDRL
VYFQNGTTCLISRNKVRDIVSIVDKYQKDRKR

Nucleotide

• Length: 579 bp

>NTDB_id=1158756 QOR56_RS09370 WP_283572268.1 1884004..1884582(-) (comE/blpR) [Streptococcus agalactiae isolate MRI Z2-265]
GTGTTTACACAAGATATTTTACACTACCTAGGCTTAGAGGTCGCAAAACAAATTAGACAAGTTGATCCTTATGCTCAGAT
TGTTTTTGTTACAACTCATTCAGAATTAATGCCTTTAACCTTTCGTTATCAGGTATCAGCTTTAGACAATATCGATAAAG
GACTTTCACAGGAAGAGTTTAGCCAAAGGATTGAGGAAGTATTGTTGTACGTAGATGGCATTTGCAATAAGCCCTTAGTG
GAAAATTCATTCTACTTTAAGTCGCGTTACAGCCAGGTACAATTACCTTTTAACGATCTTCTTTATATAGAAACATCCTC
AAGATCACATAGAGTTGTCCTTTATACTGAAAAAGATAGAATGGAATTCACAGCCACTTTGGGGGATATTTTAAAACAAG
AACCTAGGCTCTTTCAATGTCATCGCTCTTTTTTAGTAAATCCCTTAAATATTTTTAAAGTGGATAGGATAGATAGATTA
GTTTACTTCCAAAATGGAACGACTTGTCTGATTTCACGCAATAAAGTGAGAGATATAGTATCTATAGTGGATAAATATCA
AAAGGATAGAAAAAGATGA

Domains

Predicted by InterproScan.

• LytTr DNA-binding domain (LytTR) (93-180)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comE/blpR	Streptococcus mutans UA159	55.172	90.625	0.5
comE	Streptococcus infantis strain Atu-4	40.541	96.354	0.391
comE/comE1	Streptococcus equinus JB1	42.857	91.146	0.391
comE	Streptococcus pneumoniae TIGR4	39.56	94.792	0.375
comE	Streptococcus mitis SK321	39.56	94.792	0.375
comE	Streptococcus mitis NCTC 12261	39.56	94.792	0.375
comE	Streptococcus pneumoniae R6	39.56	94.792	0.375
comE	Streptococcus pneumoniae Rx1	39.56	94.792	0.375
comE	Streptococcus pneumoniae D39	39.56	94.792	0.375
comE/comE2	Streptococcus gordonii strain NCTC7865	36.458	100	0.365
comE/comE1	Streptococcus gordonii str. Challis substr. CH1	36.458	100	0.365