Detailed information NTG0115793

Bioinformatically predicted

Overview

• Name: ssbA
• Type: Machinery gene
• Locus tag: SMUFR_RS09035
• Genome accession: NZ_CP007016
• Coordinates: 1842370..1842765 (-)
• Length: 131 a.a.
• NCBI ID: WP_002263454.1
• Uniprot ID: Q8DS68
• Organism: Streptococcus mutans UA159-FR
• Function: ssDNA binding (predicted from homology) DNA processing

Genomic Context

Location: 1837370..1847765

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
SMUFR_RS09010 (SMUFR_1700)	-	1837420..1837623 (-)	204	WP_002279759.1	hypothetical protein	-
SMUFR_RS09015 (SMUFR_1701)	-	1837690..1838997 (-)	1308	WP_002263458.1	extracellular solute-binding protein	-
SMUFR_RS09020 (SMUFR_1702)	-	1838990..1839670 (-)	681	WP_002263457.1	response regulator transcription factor	-
SMUFR_RS09025 (SMUFR_1703)	-	1839670..1840992 (-)	1323	WP_002263456.1	sensor histidine kinase	-
SMUFR_RS09030 (SMUFR_1704)	-	1840992..1841954 (-)	963	WP_002263455.1	sugar ABC transporter substrate-binding protein	-
SMUFR_RS09035 (SMUFR_1705)	ssbA	1842370..1842765 (-)	396	WP_002263454.1	single-stranded DNA-binding protein	Machinery gene
SMUFR_RS09040 (SMUFR_1706)	-	1842852..1843208 (-)	357	WP_002263453.1	rhodanese-like domain-containing protein	-
SMUFR_RS09045 (SMUFR_1707)	-	1843208..1843639 (-)	432	WP_011074676.1	MarR family winged helix-turn-helix transcriptional regulator	-
SMUFR_RS09050 (SMUFR_1708)	ytpR	1843728..1844354 (-)	627	WP_002263451.1	YtpR family tRNA-binding protein	-
SMUFR_RS09055 (SMUFR_1709)	-	1844351..1844680 (-)	330	WP_002263450.1	thioredoxin family protein	-
SMUFR_RS09060 (SMUFR_1710)	-	1844658..1844966 (-)	309	WP_002263449.1	DUF4651 domain-containing protein	-
SMUFR_RS09065 (SMUFR_1711)	pepA	1845026..1846093 (+)	1068	WP_002263448.1	glutamyl aminopeptidase	-
SMUFR_RS09070 (SMUFR_1712)	proC	1846149..1846919 (+)	771	WP_002263447.1	pyrroline-5-carboxylate reductase	-
SMUFR_RS09075 (SMUFR_1713)	-	1847004..1847666 (-)	663	WP_002263446.1	type II CAAX endopeptidase family protein	-

Sequence

Protein

• Length: 131 a.a.
• Molecular weight: 14841.90 Da
• Isoelectric Point: 6.4855

>NTDB_id=115793 SMUFR_RS09035 WP_002263454.1 1842370..1842765(-) (ssbA) [Streptococcus mutans UA159-FR]
MYNKVILIGRLVATPEMVKTPKDKSVTRVTLAVNRRFKSQDGEKQADFVNVVLWGRLAETIASYGSKGSLISLDGELRTR
KYEKDGVTHFVTEVLGHSFQLLESRAQRAMRENNSENDLADLVLEEEELPF

Nucleotide

• Length: 396 bp

>NTDB_id=115793 SMUFR_RS09035 WP_002263454.1 1842370..1842765(-) (ssbA) [Streptococcus mutans UA159-FR]
ATGTATAATAAAGTTATTTTGATTGGTCGTTTAGTTGCGACACCTGAAATGGTAAAAACACCAAAGGATAAGTCTGTTAC
GCGCGTGACACTGGCTGTCAATCGGCGATTTAAAAGTCAAGATGGGGAAAAGCAGGCTGATTTTGTCAATGTTGTTCTTT
GGGGCAGATTGGCAGAAACAATAGCTTCCTATGGTAGTAAGGGAAGTCTCATCTCTCTTGATGGAGAATTGCGTACCCGT
AAATATGAAAAAGATGGCGTCACTCATTTTGTGACTGAAGTTTTGGGACACTCCTTTCAATTACTGGAAAGTCGTGCTCA
ACGTGCTATGCGTGAAAATAATTCTGAAAATGATTTGGCCGATTTGGTTCTAGAAGAGGAGGAACTCCCTTTTTAA

Domains

Predicted by InterproScan.

• Single-strand binding protein family (SSB) (3-101)

3D structure

• AlphaFold DB: Q8DS68

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
ssbA	Streptococcus mutans UA159	100	100	1
ssbB	Streptococcus sobrinus strain NIDR 6715-7	78.626	100	0.786
ssbB/cilA	Streptococcus pneumoniae TIGR4	75.573	100	0.756
ssbB/cilA	Streptococcus pneumoniae Rx1	74.809	100	0.748
ssbB/cilA	Streptococcus pneumoniae D39	74.809	100	0.748
ssbB/cilA	Streptococcus pneumoniae R6	74.809	100	0.748
ssbB/cilA	Streptococcus mitis SK321	74.809	100	0.748
ssbB/cilA	Streptococcus mitis NCTC 12261	73.282	100	0.733
ssbB	Lactococcus lactis subsp. cremoris KW2	58.036	85.496	0.496
ssbA	Bacillus subtilis subsp. subtilis str. 168	50	80.916	0.405