Detailed information    

insolico Bioinformatically predicted

Overview

Name   cinA   Type   Machinery gene
Locus tag   KJA80_RS05205 Genome accession   NZ_OD940422
Coordinates   1113228..1114496 (-) Length   422 a.a.
NCBI ID   WP_002415624.1    Uniprot ID   -
Organism   Enterococcus faecalis isolate WE0851     
Function   facilitate localization of RecA (predicted from homology)   
Homologous recombination

Genomic Context

Location: 1108228..1119496
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  KJA80_RS05185 (WE0851_01061) - 1108698..1109084 (-) 387 WP_002359008.1 YlbF family regulator -
  KJA80_RS05190 (WE0851_01062) - 1109158..1109955 (-) 798 WP_002354864.1 TIGR00282 family metallophosphoesterase -
  KJA80_RS05195 (WE0851_01063) rny 1110115..1111671 (-) 1557 WP_002354863.1 ribonuclease Y -
  KJA80_RS05200 (WE0851_01064) recA 1112068..1113114 (-) 1047 WP_002354860.1 recombinase RecA Machinery gene
  KJA80_RS05205 (WE0851_01065) cinA 1113228..1114496 (-) 1269 WP_002415624.1 competence/damage-inducible protein A Machinery gene
  KJA80_RS05210 (WE0851_01066) - 1114664..1115863 (+) 1200 WP_002415623.1 hypothetical protein -
  KJA80_RS05215 (WE0851_01067) - 1115943..1116572 (-) 630 WP_161970797.1 NAD(P)-dependent oxidoreductase -
  KJA80_RS05220 (WE0851_01068) - 1116631..1117056 (-) 426 WP_002383201.1 Rrf2 family transcriptional regulator -
  KJA80_RS05225 (WE0851_01069) - 1117145..1117528 (-) 384 WP_010712905.1 YccF domain-containing protein -
  KJA80_RS05230 (WE0851_01070) - 1117692..1118483 (+) 792 WP_002415619.1 hypothetical protein -

Sequence

Protein


Download         Length: 422 a.a.        Molecular weight: 46108.45 Da        Isoelectric Point: 4.7356

>NTDB_id=1150609 KJA80_RS05205 WP_002415624.1 1113228..1114496(-) (cinA) [Enterococcus faecalis isolate WE0851]
MLLEKGKSMKAEIIAVGTELLLGQVVNTNATFLSEELAALGIDVYYQTVVGDNGGRLETLLTEAEQRSDLIVLCGGLGPT
EDDLTKQVVAQHLHKSLVEDQEGLNRLHQFFQQSKRPMTENNLRQVLAIEGGQVLQNPTGLAVGSFVTEGTTSYLLLPGP
PNELIPMFQQAARPLLIDAFPQEEQLISRVLRFYGIGESQLVTEIQSLIVHQTNPTIAPYAKPNEVTLRLTVKTKDLVAG
EELLTATEEKVLAKVGDYFYGYGDDNSLAKVTVDLLLQNGQTVTAAESLTAGLFQSTLGEIAGASKIFKGGFVTYSQETK
ENFLGISHELLEEHGTVSEACAKEMAEKARQLAKSNYGLSFTGVAGDPIEGQPTGTVWIGLAEEGQPTVAECFHFNRDRN
YIRQSAVMRGLDLLRRRIINKK

Nucleotide


Download         Length: 1269 bp        

>NTDB_id=1150609 KJA80_RS05205 WP_002415624.1 1113228..1114496(-) (cinA) [Enterococcus faecalis isolate WE0851]
ATGTTATTAGAGAAGGGGAAATCAATGAAAGCAGAGATCATTGCAGTCGGAACAGAGTTATTACTGGGACAAGTAGTGAA
TACCAACGCCACCTTTTTATCAGAAGAGTTAGCTGCGCTAGGCATCGATGTTTACTATCAGACCGTTGTTGGAGATAACG
GCGGCCGCTTAGAAACGCTACTAACAGAAGCAGAACAAAGAAGTGATTTAATTGTCCTATGTGGAGGGCTAGGACCTACA
GAAGACGATTTAACCAAGCAAGTTGTCGCACAACATCTCCATAAATCATTAGTAGAAGATCAAGAAGGATTGAACCGCTT
GCACCAGTTTTTCCAACAGTCTAAGCGGCCAATGACGGAAAATAATCTACGACAAGTGTTAGCCATTGAAGGTGGACAAG
TTCTTCAAAACCCGACAGGATTAGCGGTTGGTTCTTTCGTAACAGAAGGCACAACAAGCTATTTGCTCTTACCAGGACCA
CCCAATGAATTAATTCCGATGTTCCAACAAGCGGCACGACCTTTATTGATTGATGCGTTTCCACAAGAAGAACAATTGAT
TTCAAGAGTCTTGCGTTTTTATGGGATTGGTGAATCACAGCTGGTGACCGAGATTCAATCGTTGATTGTGCACCAAACGA
ATCCAACCATTGCGCCTTATGCTAAGCCTAATGAAGTGACACTTCGTTTAACAGTTAAAACAAAAGACTTAGTAGCTGGC
GAAGAATTATTAACAGCGACGGAAGAAAAGGTTTTAGCTAAAGTGGGGGACTATTTTTATGGGTATGGGGATGACAATAG
TTTAGCCAAGGTAACAGTGGATTTGTTATTACAAAACGGACAAACCGTCACGGCTGCTGAGAGCCTCACTGCTGGCCTAT
TCCAAAGTACACTGGGGGAAATTGCGGGTGCTTCGAAGATTTTTAAGGGAGGCTTCGTGACGTATTCGCAAGAAACAAAA
GAGAACTTTTTAGGAATTTCTCATGAACTTTTAGAAGAGCATGGCACGGTAAGTGAAGCGTGTGCCAAAGAAATGGCAGA
GAAAGCGCGTCAGTTAGCTAAATCTAACTATGGTTTATCATTTACTGGGGTCGCTGGTGACCCAATCGAAGGCCAACCGA
CAGGCACTGTTTGGATTGGGCTGGCGGAAGAAGGCCAACCAACCGTTGCAGAATGTTTCCATTTTAACCGTGACCGAAAT
TATATTAGACAGAGTGCGGTTATGCGAGGATTAGATCTTTTGCGGCGCCGAATCATTAATAAAAAATAA

Domains

Predicted by InterproScan.

Damage-inducible protein CinA KH domain (CinA_KH)

(188-261)

Probable molybdopterin binding domain (MoCF_biosynth)

(13-176)

Competence-damaged protein (CinA)

(266-417)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  cinA Streptococcus mitis SK321

51.537

100

0.517
  cinA Streptococcus mutans UA159

52.153

99.052

0.517
  cinA Streptococcus mitis NCTC 12261

51.3

100

0.514
  cinA Streptococcus pneumoniae TIGR4

50.591

100

0.507
  cinA Streptococcus pneumoniae D39

50.355

100

0.505
  cinA Streptococcus pneumoniae R6

50.118

100

0.502
  cinA Streptococcus pneumoniae Rx1

50.118

100

0.502
  cinA Bacillus subtilis subsp. subtilis str. 168

48.522

96.209

0.467
  cinA Streptococcus suis isolate S10

44.039

97.393

0.429

Multiple sequence alignment