Detailed information NTG1142684

Bioinformatically predicted

Overview

• Name: comGC
• Type: Machinery gene
• Locus tag: DQL57_RS05435
• Genome accession: NZ_LS483491
• Coordinates: 1183078..1183395 (-)
• Length: 105 a.a.
• NCBI ID: WP_083498177.1
• Uniprot ID: A0AAW7MBM0
• Organism: Staphylococcus auricularis strain NCTC12101
• Function: dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1178078..1188395

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
DQL57_RS05400 (NCTC12101_01132)	gcvPA	1178630..1179982 (-)	1353	WP_059107298.1	aminomethyl-transferring glycine dehydrogenase subunit GcvPA	-
DQL57_RS05405 (NCTC12101_01133)	gcvT	1180002..1181093 (-)	1092	WP_059107297.1	glycine cleavage system aminomethyltransferase GcvT	-
DQL57_RS05410	-	1181274..1181780 (-)	507	WP_059107296.1	shikimate kinase	-
DQL57_RS05420 (NCTC12101_01135)	-	1181954..1182346 (-)	393	WP_083498173.1	ComGF family competence protein	-
DQL57_RS05425 (NCTC12101_01136)	-	1182371..1182664 (-)	294	WP_059107294.1	hypothetical protein	-
DQL57_RS05430 (NCTC12101_01137)	comGD	1182651..1183088 (-)	438	WP_059107293.1	competence type IV pilus minor pilin ComGD	-
DQL57_RS05435 (NCTC12101_01138)	comGC	1183078..1183395 (-)	318	WP_083498177.1	competence type IV pilus major pilin ComGC	Machinery gene
DQL57_RS05440 (NCTC12101_01139)	comGB	1183473..1184546 (-)	1074	WP_059107292.1	competence type IV pilus assembly protein ComGB	-
DQL57_RS05445	comGA	1184518..1185492 (-)	975	Protein_1085	competence type IV pilus ATPase ComGA	-
DQL57_RS05450 (NCTC12101_01142)	-	1185595..1186215 (-)	621	WP_059107291.1	MBL fold metallo-hydrolase	-
DQL57_RS05455 (NCTC12101_01143)	-	1186231..1186542 (-)	312	WP_059107290.1	MTH1187 family thiamine-binding protein	-
DQL57_RS05460 (NCTC12101_01144)	-	1186542..1187528 (-)	987	WP_059107289.1	ROK family glucokinase	-
DQL57_RS05465 (NCTC12101_01145)	-	1187529..1187729 (-)	201	WP_059107288.1	YqgQ family protein	-

Sequence

Protein

• Length: 105 a.a.
• Molecular weight: 11780.96 Da
• Isoelectric Point: 9.7109

>NTDB_id=1142684 DQL57_RS05435 WP_083498177.1 1183078..1183395(-) (comGC) [Staphylococcus auricularis strain NCTC12101]
MQLNIKKLRQKAFTLIEMLLVLLIISILLILIIPNIAKQSENIQAKGCDAQLKMVNSQIEAYTLKHDRKPNTIDDLVQDG
FIKENQKRCKSGAVIAIQNGEAHAT

Nucleotide

• Length: 318 bp

>NTDB_id=1142684 DQL57_RS05435 WP_083498177.1 1183078..1183395(-) (comGC) [Staphylococcus auricularis strain NCTC12101]
ATTCAATTGAATATAAAAAAACTCAGACAAAAAGCTTTTACGTTGATCGAAATGTTACTTGTATTATTGATTATTAGTAT
TTTGCTCATCCTCATAATCCCGAACATCGCGAAACAATCTGAAAACATACAAGCTAAAGGTTGTGATGCACAACTGAAAA
TGGTGAACAGTCAAATTGAAGCATATACGCTAAAACATGATAGAAAACCGAATACAATTGATGATTTAGTGCAAGATGGT
TTTATTAAAGAAAATCAAAAGAGATGTAAATCAGGTGCCGTGATTGCTATTCAAAACGGGGAAGCGCATGCTACTTAA

Domains

Predicted by InterproScan.

• Prokaryotic N-terminal methylation motif (N_methyl) (9-32)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comGC	Staphylococcus aureus N315	72.917	91.429	0.667
comGC	Staphylococcus aureus MW2	72.917	91.429	0.667
comYC	Streptococcus gordonii str. Challis substr. CH1	50	78.095	0.39
comGC/cglC	Streptococcus pneumoniae R6	44.944	84.762	0.381
comGC/cglC	Streptococcus pneumoniae TIGR4	44.944	84.762	0.381
comGC/cglC	Streptococcus pneumoniae Rx1	44.944	84.762	0.381
comGC/cglC	Streptococcus pneumoniae D39	44.944	84.762	0.381
comGC/cglC	Streptococcus mitis SK321	47.059	80.952	0.381
comGC/cglC	Streptococcus mitis NCTC 12261	47.059	80.952	0.381
comGC	Bacillus subtilis subsp. subtilis str. 168	42.553	89.524	0.381
comYC	Streptococcus suis isolate S10	47.561	78.095	0.371
comYC	Streptococcus mutans UA140	47.561	78.095	0.371
comYC	Streptococcus mutans UA159	47.561	78.095	0.371