Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Machinery gene
Locus tag   DQM57_RS00235 Genome accession   NZ_LS483369
Coordinates   41266..42498 (-) Length   410 a.a.
NCBI ID   WP_107996268.1    Uniprot ID   A0A7T3BLI8
Organism   Neisseria cinerea strain NCTC10294     
Function   assembly of type IV pilus (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 36266..47498
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  DQM57_RS00205 (NCTC10294_00040) - 36931..37377 (+) 447 WP_003676595.1 DUF441 domain-containing protein -
  DQM57_RS00215 (NCTC10294_00042) pilF 37727..39403 (+) 1677 WP_108043478.1 type IV-A pilus assembly ATPase PilB Machinery gene
  DQM57_RS00220 (NCTC10294_00043) - 39496..39705 (-) 210 WP_039854241.1 DNA gyrase inhibitor YacG -
  DQM57_RS00225 (NCTC10294_00044) coaE 39698..40330 (-) 633 WP_111726190.1 dephospho-CoA kinase -
  DQM57_RS00230 (NCTC10294_00045) pilD 40332..41192 (-) 861 WP_111726191.1 A24 family peptidase Machinery gene
  DQM57_RS00235 (NCTC10294_00046) pilG 41266..42498 (-) 1233 WP_107996268.1 type II secretion system F family protein Machinery gene
  DQM57_RS00240 (NCTC10294_00047) pgi 42856..44499 (+) 1644 WP_111726193.1 glucose-6-phosphate isomerase -
  DQM57_RS00245 (NCTC10294_00048) dapD 44709..45530 (+) 822 WP_003676582.1 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase -
  DQM57_RS00250 (NCTC10294_00049) fabI 45697..46482 (+) 786 WP_108043474.1 enoyl-ACP reductase FabI -
  DQM57_RS00255 (NCTC10294_00050) mscL 46632..47072 (+) 441 WP_107959664.1 large conductance mechanosensitive channel protein MscL -

Sequence

Protein


Download         Length: 410 a.a.        Molecular weight: 45481.56 Da        Isoelectric Point: 9.7121

>NTDB_id=1138933 DQM57_RS00235 WP_107996268.1 41266..42498(-) (pilG) [Neisseria cinerea strain NCTC10294]
MAKNGGLSLFSKKEKRFIFEGRHSASDKIVNGEVSAFTEEEARKKLTKRGIRPLQISRIKTTSKRKITQEDITVFTRQLA
TMMKAGLPLMQAFEIVARGHANPSMTEMLMEIRSEVEQGTTLSRAFSRYPKYFDRFYCNLVSAGEMGGVLESLLDKLAVY
KEKTQSIRKKVKTALTYPISVIAVAIGLVFVMMIFVLPAFKEVYSNMGAELPALTQAVMDISEFFVAYGWIILIALGCSI
YGFLKLKERSPKIQRRMDALLIRMPIFGEIVRKATIARWGRTTATLFAAGVPLVDVLDSTAGAAGNIIYEEATHEIRTRV
IQGLSMTSGMRATELFPNMMVQMASIGEESGSLDDMLNKASEFYEDEVDNAVGRLSAMMEPIIIVVLGLIIGTLLVAMYL
PLFNLGSVIG

Nucleotide


Download         Length: 1233 bp        

>NTDB_id=1138933 DQM57_RS00235 WP_107996268.1 41266..42498(-) (pilG) [Neisseria cinerea strain NCTC10294]
ATGGCTAAAAACGGGGGACTTTCTTTATTTTCAAAGAAAGAAAAACGCTTTATCTTTGAAGGCAGGCATTCTGCCTCCGA
CAAAATAGTCAACGGCGAAGTATCTGCGTTTACCGAAGAAGAGGCACGCAAGAAACTGACAAAACGCGGCATCCGCCCGT
TACAGATTAGCCGTATAAAAACAACTTCAAAACGCAAAATTACGCAAGAAGACATTACCGTCTTCACTCGCCAGTTGGCA
ACTATGATGAAAGCGGGCCTGCCGCTGATGCAGGCATTTGAGATTGTGGCGCGCGGTCATGCCAACCCGTCCATGACGGA
AATGTTGATGGAAATCCGTAGTGAAGTAGAACAGGGCACCACTCTGAGTCGCGCATTCTCACGCTATCCCAAATACTTCG
ACCGCTTCTACTGCAATCTGGTTTCTGCAGGTGAGATGGGCGGCGTATTGGAAAGCCTGCTGGATAAACTGGCAGTCTAT
AAAGAAAAAACACAATCCATCCGTAAAAAAGTAAAAACTGCGCTGACTTATCCGATATCGGTAATTGCCGTCGCCATCGG
CTTGGTATTTGTCATGATGATCTTCGTACTGCCAGCGTTTAAAGAAGTTTATTCCAATATGGGTGCCGAATTACCCGCGC
TGACCCAGGCCGTCATGGATATTTCCGAGTTTTTTGTCGCATACGGCTGGATAATTCTGATTGCGCTTGGCTGCTCAATA
TACGGCTTCCTCAAACTTAAAGAGCGTTCACCCAAAATACAACGCCGTATGGACGCATTGCTGATTCGTATGCCGATTTT
CGGAGAAATCGTACGCAAAGCAACCATTGCACGGTGGGGTAGGACGACGGCAACATTGTTTGCAGCGGGCGTACCGCTTG
TTGACGTATTGGATTCTACGGCTGGTGCGGCAGGCAACATAATTTATGAGGAAGCCACCCATGAAATCCGCACACGCGTA
ATTCAAGGCCTGTCGATGACCTCAGGAATGCGTGCGACGGAACTTTTCCCCAATATGATGGTACAGATGGCATCCATTGG
TGAGGAATCGGGCTCTTTAGACGACATGCTCAATAAAGCCTCCGAGTTTTATGAAGACGAGGTAGACAATGCTGTCGGCC
GCCTATCCGCCATGATGGAACCGATTATTATCGTGGTTTTAGGTCTGATTATTGGTACGCTCCTAGTAGCAATGTATCTG
CCATTGTTCAACTTGGGTAGTGTGATCGGCTGA

Domains

Predicted by InterproScan.

Type II secretion system (T2SS), protein F (T2SSF)

(75-198)

Type II secretion system (T2SS), protein F (T2SSF)

(281-401)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A7T3BLI8

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Neisseria gonorrhoeae MS11

88.753

99.756

0.885
  pilG Neisseria meningitidis 44/76-A

88.02

99.756

0.878
  pilC Acinetobacter baumannii D1279779

47.739

97.073

0.463
  pilC Acinetobacter baylyi ADP1

46.231

97.073

0.449
  pilC Legionella pneumophila strain ERS1305867

46.096

96.829

0.446
  pilC Pseudomonas stutzeri DSM 10701

45.137

97.805

0.441
  pilC Vibrio cholerae strain A1552

41.935

98.293

0.412
  pilC Vibrio campbellii strain DS40M4

38.958

98.293

0.383

Multiple sequence alignment