Detailed information NTG1128466

Bioinformatically predicted

Overview

• Name: ssbA
• Type: Machinery gene
• Locus tag: FQT45_RS00785
• Genome accession: NZ_LR595858
• Coordinates: 124441..124836 (+)
• Length: 131 a.a.
• NCBI ID: WP_077323571.1
• Uniprot ID: -
• Organism: Streptococcus pseudoporcinus strain NCTC10228
• Function: ssDNA binding (predicted from homology) DNA processing

Genomic Context

Location: 119441..129836

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
FQT45_RS00750 (NCTC10228_00154)	-	119472..119924 (+)	453	WP_077323565.1	hypothetical protein	-
FQT45_RS00755 (NCTC10228_00155)	-	119936..120583 (+)	648	WP_077323566.1	CPBP family intramembrane glutamic endopeptidase	-
FQT45_RS00760 (NCTC10228_00156)	proC	120763..121533 (-)	771	WP_077323567.1	pyrroline-5-carboxylate reductase	-
FQT45_RS00765 (NCTC10228_00157)	pepA	121552..122619 (-)	1068	WP_077323568.1	glutamyl aminopeptidase	-
FQT45_RS00770 (NCTC10228_00158)	-	122817..123104 (+)	288	WP_077323578.1	DUF4651 domain-containing protein	-
FQT45_RS00775 (NCTC10228_00159)	-	123097..123432 (+)	336	WP_077323569.1	thioredoxin family protein	-
FQT45_RS00780 (NCTC10228_00160)	ytpR	123432..124058 (+)	627	WP_077323570.1	YtpR family tRNA-binding protein	-
FQT45_RS00785 (NCTC10228_00162)	ssbA	124441..124836 (+)	396	WP_077323571.1	single-stranded DNA-binding protein	Machinery gene
FQT45_RS00790 (NCTC10228_00163)	-	125082..125252 (-)	171	WP_223837018.1	hypothetical protein	-
FQT45_RS00795 (NCTC10228_00164)	-	125501..126142 (-)	642	WP_077323572.1	deoxynucleoside kinase	-
FQT45_RS00800 (NCTC10228_00165)	dusB	126161..127138 (-)	978	WP_077323573.1	tRNA dihydrouridine synthase DusB	-
FQT45_RS00805 (NCTC10228_00166)	hslO	127125..127997 (-)	873	WP_077323574.1	Hsp33 family molecular chaperone HslO	-
FQT45_RS00810 (NCTC10228_00167)	-	128149..129639 (-)	1491	WP_142355124.1	M protein trans-acting positive regulator PRD domain-containing protein	-

Sequence

Protein

• Length: 131 a.a.
• Molecular weight: 14981.15 Da
• Isoelectric Point: 5.2863

>NTDB_id=1128466 FQT45_RS00785 WP_077323571.1 124441..124836(+) (ssbA) [Streptococcus pseudoporcinus strain NCTC10228]
MYNKVIMIGRLVSDPDLIKTPNDKHLCRVSIAVNRRFKNAEGERQVDFVNLVLWGRLAESLASYGSKGSLVSLDGELRIR
KYEKDDKTAYMTEVLCQSYQLLESRAQRAVRENNLADDLCDLLLDEEALPF

Nucleotide

• Length: 396 bp

>NTDB_id=1128466 FQT45_RS00785 WP_077323571.1 124441..124836(+) (ssbA) [Streptococcus pseudoporcinus strain NCTC10228]
ATGTATAATAAAGTAATTATGATTGGTCGACTGGTTAGTGATCCTGATTTAATTAAGACGCCAAACGATAAGCACCTGTG
CCGTGTTTCAATTGCGGTCAATCGACGGTTCAAAAATGCCGAAGGTGAACGTCAAGTTGATTTTGTTAATCTTGTTCTTT
GGGGCCGATTGGCTGAAAGTCTGGCTTCGTATGGTAGCAAGGGTAGTCTGGTTTCGCTTGATGGGGAGCTACGTATCCGC
AAGTACGAAAAAGACGACAAGACAGCTTATATGACTGAGGTTTTATGCCAATCCTATCAACTCTTAGAGAGTCGCGCTCA
GCGGGCTGTTAGAGAAAACAACTTGGCTGATGATCTTTGTGATTTACTTCTAGACGAAGAGGCACTCCCCTTTTAG

Domains

Predicted by InterproScan.

• Single-strand binding protein family (SSB) (3-101)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
ssbA	Streptococcus mutans UA159	70.992	100	0.71
ssbB	Streptococcus sobrinus strain NIDR 6715-7	67.176	100	0.672
ssbB/cilA	Streptococcus pneumoniae Rx1	67.176	100	0.672
ssbB/cilA	Streptococcus pneumoniae D39	67.176	100	0.672
ssbB/cilA	Streptococcus pneumoniae R6	67.176	100	0.672
ssbB/cilA	Streptococcus mitis NCTC 12261	67.176	100	0.672
ssbB/cilA	Streptococcus pneumoniae TIGR4	66.412	100	0.664
ssbB/cilA	Streptococcus mitis SK321	65.649	100	0.656
ssbB	Lactococcus lactis subsp. cremoris KW2	53.571	85.496	0.458
ssb	Latilactobacillus sakei subsp. sakei 23K	42.735	89.313	0.382