Detailed information NTG1128117

Bioinformatically predicted

Overview

• Name: ssbA
• Type: Machinery gene
• Locus tag: FGL17_RS00840
• Genome accession: NZ_LR594052
• Coordinates: 129389..129784 (+)
• Length: 131 a.a.
• NCBI ID: WP_093959147.1
• Uniprot ID: A0A4V0GXR2
• Organism: Streptococcus porcinus strain NCTC10924
• Function: ssDNA binding (predicted from homology) DNA processing

Genomic Context

Location: 124389..134784

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
FGL17_RS00800 (NCTC10924_00163)	-	124391..124600 (+)	210	WP_093959144.1	helix-turn-helix transcriptional regulator	-
FGL17_RS00805 (NCTC10924_00164)	-	124597..125049 (+)	453	WP_093959145.1	hypothetical protein	-
FGL17_RS00810 (NCTC10924_00165)	-	125061..125702 (+)	642	WP_093959146.1	CPBP family intramembrane glutamic endopeptidase	-
FGL17_RS00815 (NCTC10924_00166)	proC	125752..126522 (-)	771	WP_003085990.1	pyrroline-5-carboxylate reductase	-
FGL17_RS00820 (NCTC10924_00167)	pepA	126540..127607 (-)	1068	WP_003083897.1	glutamyl aminopeptidase	-
FGL17_RS00825 (NCTC10924_00168)	-	127803..128090 (+)	288	WP_003084445.1	DUF4651 domain-containing protein	-
FGL17_RS00830 (NCTC10924_00169)	-	128083..128400 (+)	318	WP_003082874.1	thioredoxin family protein	-
FGL17_RS00835 (NCTC10924_00170)	ytpR	128418..129044 (+)	627	WP_003085847.1	YtpR family tRNA-binding protein	-
FGL17_RS00840 (NCTC10924_00172)	ssbA	129389..129784 (+)	396	WP_093959147.1	single-stranded DNA-binding protein	Machinery gene
FGL17_RS00845 (NCTC10924_00173)	-	130254..131210 (+)	957	WP_093959148.1	ABC transporter substrate-binding protein	-
FGL17_RS00850 (NCTC10924_00174)	-	131226..132188 (+)	963	WP_003085535.1	ABC transporter substrate-binding protein	-
FGL17_RS00855 (NCTC10924_00175)	-	132206..133090 (+)	885	WP_003083454.1	ABC transporter permease	-
FGL17_RS00860 (NCTC10924_00176)	-	133099..133902 (+)	804	WP_003083252.1	ABC transporter ATP-binding protein	-
FGL17_RS00865 (NCTC10924_00177)	-	133991..134632 (-)	642	WP_138083592.1	deoxynucleoside kinase	-

Sequence

Protein

• Length: 131 a.a.
• Molecular weight: 14990.27 Da
• Isoelectric Point: 7.7422

>NTDB_id=1128117 FGL17_RS00840 WP_093959147.1 129389..129784(+) (ssbA) [Streptococcus porcinus strain NCTC10924]
MYNKVIMIGRLVNHPDLIKTPKDKHVCRVSIAVNRRFKNAEGERQVDFVNLVLWGRLAESMASYGSKGGLISLDGELRIR
KYEKDGKTAYMTEVLCQSYQLLESRAQRAVRENNLTDDLCDLVLDEEALPF

Nucleotide

• Length: 396 bp

>NTDB_id=1128117 FGL17_RS00840 WP_093959147.1 129389..129784(+) (ssbA) [Streptococcus porcinus strain NCTC10924]
ATGTATAATAAAGTAATCATGATTGGTCGATTAGTTAACCATCCCGACTTGATAAAGACCCCAAAAGATAAGCATGTGTG
CCGAGTTTCAATTGCTGTCAATCGCCGTTTTAAAAATGCTGAAGGTGAGCGTCAAGTTGATTTTGTTAATCTTGTTCTTT
GGGGACGATTGGCTGAAAGCATGGCTTCGTATGGTAGCAAAGGTGGTCTGATTTCGCTTGATGGTGAGTTACGCATCCGC
AAGTACGAAAAAGATGGTAAGACGGCTTATATGACCGAAGTCCTATGCCAATCTTATCAACTTTTAGAGAGTCGAGCTCA
GCGGGCTGTTAGAGAAAACAACCTGACTGACGACCTTTGTGATTTGGTTTTAGATGAAGAGGCCTTACCTTTCTAA

Domains

Predicted by InterproScan.

• Single-strand binding protein family (SSB) (3-101)

3D structure

• AlphaFold DB: A0A4V0GXR2

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
ssbA	Streptococcus mutans UA159	74.046	100	0.74
ssbB/cilA	Streptococcus pneumoniae Rx1	67.176	100	0.672
ssbB/cilA	Streptococcus pneumoniae D39	67.176	100	0.672
ssbB/cilA	Streptococcus pneumoniae R6	67.176	100	0.672
ssbB/cilA	Streptococcus mitis NCTC 12261	67.176	100	0.672
ssbB	Streptococcus sobrinus strain NIDR 6715-7	66.412	100	0.664
ssbB/cilA	Streptococcus pneumoniae TIGR4	66.412	100	0.664
ssbB/cilA	Streptococcus mitis SK321	65.649	100	0.656
ssbB	Lactococcus lactis subsp. cremoris KW2	52.679	85.496	0.45
ssb	Latilactobacillus sakei subsp. sakei 23K	42.478	86.26	0.366