Detailed information NTG1122003

Bioinformatically predicted

Overview

• Name: ssbA
• Type: Machinery gene
• Locus tag: EL147_RS05250
• Genome accession: NZ_LR134341
• Coordinates: 1109574..1109969 (-)
• Length: 131 a.a.
• NCBI ID: WP_007895291.1
• Uniprot ID: G5K9Z6
• Organism: Streptococcus pseudoporcinus strain NCTC13786
• Function: ssDNA binding (predicted from homology) DNA processing

Genomic Context

Location: 1104574..1114969

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
EL147_RS05230 (NCTC13786_01044)	hslO	1105514..1106386 (+)	873	WP_007895665.1	Hsp33 family molecular chaperone HslO	-
EL147_RS05235 (NCTC13786_01045)	dusB	1106373..1107350 (+)	978	WP_007895377.1	tRNA dihydrouridine synthase DusB	-
EL147_RS05240 (NCTC13786_01046)	-	1107369..1108010 (+)	642	WP_007895671.1	deoxynucleoside kinase	-
EL147_RS05245 (NCTC13786_01047)	-	1108265..1109329 (+)	1065	WP_007895351.1	type I restriction endonuclease	-
EL147_RS05250 (NCTC13786_01048)	ssbA	1109574..1109969 (-)	396	WP_007895291.1	single-stranded DNA-binding protein	Machinery gene
EL147_RS10585 (NCTC13786_01049)	-	1110137..1110307 (+)	171	WP_007896340.1	hypothetical protein	-
EL147_RS05255 (NCTC13786_01050)	ytpR	1110352..1110978 (-)	627	WP_007895568.1	YtpR family tRNA-binding protein	-
EL147_RS05260 (NCTC13786_01051)	-	1110978..1111313 (-)	336	WP_007895267.1	thioredoxin family protein	-
EL147_RS05265 (NCTC13786_01052)	-	1111306..1111593 (-)	288	WP_007895673.1	DUF4651 domain-containing protein	-
EL147_RS05270 (NCTC13786_01053)	pepA	1111790..1112857 (+)	1068	WP_007895486.1	glutamyl aminopeptidase	-
EL147_RS05275 (NCTC13786_01054)	proC	1112876..1113646 (+)	771	WP_007895331.1	pyrroline-5-carboxylate reductase	-
EL147_RS05280 (NCTC13786_01055)	-	1113824..1114471 (-)	648	WP_007895353.1	CPBP family intramembrane glutamic endopeptidase	-
EL147_RS05285 (NCTC13786_01056)	-	1114483..1114935 (-)	453	WP_007895660.1	hypothetical protein	-

Sequence

Protein

• Length: 131 a.a.
• Molecular weight: 15011.18 Da
• Isoelectric Point: 5.2863

>NTDB_id=1122003 EL147_RS05250 WP_007895291.1 1109574..1109969(-) (ssbA) [Streptococcus pseudoporcinus strain NCTC13786]
MYNKVIMIGRLVSDPDLIKTPNDKHLCRVSIAVNRRFKNAEGERQVDFVNLVLWGRLAESLTSYGSKGSLVSLDGELRIR
KYEKDDKTAYMTEVLCQSYQLLESRAQRAVRENNLADDLCDLLLDEEALPF

Nucleotide

• Length: 396 bp

>NTDB_id=1122003 EL147_RS05250 WP_007895291.1 1109574..1109969(-) (ssbA) [Streptococcus pseudoporcinus strain NCTC13786]
ATGTATAATAAAGTAATTATGATTGGTCGGCTGGTTAGTGATCCTGATTTAATTAAGACGCCAAACGATAAGCACCTGTG
CCGTGTTTCAATTGCGGTCAATCGACGGTTCAAAAATGCCGAAGGTGAACGTCAAGTTGATTTTGTTAATCTTGTTCTTT
GGGGACGATTAGCTGAAAGTCTGACTTCGTATGGTAGCAAGGGTAGTCTGGTTTCGCTTGATGGGGAGCTACGTATCCGC
AAGTACGAAAAAGACGACAAGACAGCTTATATGACTGAGGTTTTATGCCAATCCTATCAACTCTTAGAGAGTCGCGCTCA
GCGGGCTGTTAGAGAAAACAACTTGGCTGATGATCTTTGTGATTTACTTCTAGACGAAGAGGCACTTCCTTTTTAA

Domains

Predicted by InterproScan.

• Single-strand binding protein family (SSB) (3-101)

3D structure

• AlphaFold DB: G5K9Z6

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
ssbA	Streptococcus mutans UA159	70.229	100	0.702
ssbB	Streptococcus sobrinus strain NIDR 6715-7	67.176	100	0.672
ssbB/cilA	Streptococcus pneumoniae Rx1	66.412	100	0.664
ssbB/cilA	Streptococcus pneumoniae D39	66.412	100	0.664
ssbB/cilA	Streptococcus pneumoniae R6	66.412	100	0.664
ssbB/cilA	Streptococcus mitis NCTC 12261	66.412	100	0.664
ssbB/cilA	Streptococcus pneumoniae TIGR4	65.649	100	0.656
ssbB/cilA	Streptococcus mitis SK321	64.885	100	0.649
ssbB	Lactococcus lactis subsp. cremoris KW2	53.571	85.496	0.458
ssb	Latilactobacillus sakei subsp. sakei 23K	41.88	89.313	0.374