Detailed information NTG1121388

Bioinformatically predicted

Overview

• Name: ssbA
• Type: Machinery gene
• Locus tag: EL130_RS00845
• Genome accession: NZ_LR134320
• Coordinates: 158960..159355 (-)
• Length: 131 a.a.
• NCBI ID: WP_002269471.1
• Uniprot ID: A0A829BS80
• Organism: Streptococcus mutans strain NCTC10832
• Function: ssDNA binding (predicted from homology) DNA processing

Genomic Context

Location: 153960..164355

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
EL130_RS00820	-	154011..154214 (-)	204	Protein_151	hypothetical protein	-
EL130_RS00825 (NCTC10832_00152)	-	154280..155587 (-)	1308	WP_002263458.1	extracellular solute-binding protein	-
EL130_RS00830 (NCTC10832_00153)	-	155580..156260 (-)	681	WP_002263457.1	response regulator transcription factor	-
EL130_RS00835 (NCTC10832_00154)	-	156260..157582 (-)	1323	WP_002263456.1	sensor histidine kinase	-
EL130_RS00840 (NCTC10832_00155)	-	157582..158544 (-)	963	WP_002274167.1	sugar ABC transporter substrate-binding protein	-
EL130_RS00845 (NCTC10832_00156)	ssbA	158960..159355 (-)	396	WP_002269471.1	single-stranded DNA-binding protein	Machinery gene
EL130_RS00850 (NCTC10832_00157)	-	159442..159798 (-)	357	WP_002264000.1	rhodanese-like domain-containing protein	-
EL130_RS00855 (NCTC10832_00158)	-	159798..160229 (-)	432	WP_018110218.1	MarR family winged helix-turn-helix transcriptional regulator	-
EL130_RS00860 (NCTC10832_00159)	ytpR	160318..160944 (-)	627	WP_002267841.1	YtpR family tRNA-binding protein	-
EL130_RS00865 (NCTC10832_00160)	-	160941..161270 (-)	330	WP_002265890.1	thioredoxin family protein	-
EL130_RS00870 (NCTC10832_00161)	-	161248..161556 (-)	309	WP_002263449.1	DUF4651 domain-containing protein	-
EL130_RS00875 (NCTC10832_00162)	pepA	161616..162683 (+)	1068	WP_002283284.1	glutamyl aminopeptidase	-
EL130_RS00880 (NCTC10832_00163)	proC	162739..163509 (+)	771	WP_002263447.1	pyrroline-5-carboxylate reductase	-
EL130_RS00885 (NCTC10832_00164)	-	163594..164256 (-)	663	WP_002263446.1	type II CAAX endopeptidase family protein	-

Sequence

Protein

• Length: 131 a.a.
• Molecular weight: 14853.96 Da
• Isoelectric Point: 6.4855

>NTDB_id=1121388 EL130_RS00845 WP_002269471.1 158960..159355(-) (ssbA) [Streptococcus mutans strain NCTC10832]
MYNKVILIGRLVATPEMVKTPKDKSVTRVTLAVNRRFKSQDGEKQADFVNVVLWGRLAEIIASYGSKGSLISLDGELRTR
KYEKDGVTHFVTEVLGHSFQLLESRAQRAMRENNSENDLADLVLEEEELPF

Nucleotide

• Length: 396 bp

>NTDB_id=1121388 EL130_RS00845 WP_002269471.1 158960..159355(-) (ssbA) [Streptococcus mutans strain NCTC10832]
ATGTATAATAAAGTTATTTTGATTGGTCGTTTAGTTGCGACACCTGAAATGGTAAAAACACCAAAGGATAAGTCTGTTAC
GCGCGTGACACTGGCTGTCAATCGGCGATTTAAAAGTCAAGATGGGGAAAAGCAGGCTGATTTTGTCAATGTTGTTCTTT
GGGGCAGATTGGCAGAAATAATAGCTTCCTATGGTAGTAAGGGAAGTCTCATCTCTCTTGATGGAGAATTGCGTACCCGT
AAATATGAAAAAGATGGCGTCACTCATTTTGTGACTGAAGTTTTGGGACACTCCTTTCAATTACTGGAAAGTCGTGCTCA
ACGTGCTATGCGTGAAAATAATTCTGAAAATGATTTGGCCGATTTGGTTCTAGAAGAGGAGGAACTCCCTTTTTAA

Domains

Predicted by InterproScan.

• Single-strand binding protein family (SSB) (3-101)

3D structure

• AlphaFold DB: A0A829BS80

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
ssbA	Streptococcus mutans UA159	99.237	100	0.992
ssbB	Streptococcus sobrinus strain NIDR 6715-7	78.626	100	0.786
ssbB/cilA	Streptococcus pneumoniae TIGR4	74.809	100	0.748
ssbB/cilA	Streptococcus pneumoniae Rx1	74.046	100	0.74
ssbB/cilA	Streptococcus pneumoniae D39	74.046	100	0.74
ssbB/cilA	Streptococcus pneumoniae R6	74.046	100	0.74
ssbB/cilA	Streptococcus mitis SK321	74.046	100	0.74
ssbB/cilA	Streptococcus mitis NCTC 12261	73.282	100	0.733
ssbB	Lactococcus lactis subsp. cremoris KW2	57.143	85.496	0.489
ssbA	Bacillus subtilis subsp. subtilis str. 168	50	80.916	0.405