Detailed information NTG1121208

Bioinformatically predicted

Overview

• Name: comYC
• Type: Machinery gene
• Locus tag: EL139_RS02665
• Genome accession: NZ_LR134316
• Coordinates: 492458..492784 (-)
• Length: 108 a.a.
• NCBI ID: WP_111714771.1
• Uniprot ID: -
• Organism: Streptococcus dysgalactiae subsp. equisimilis strain NCTC6181
• Function: dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 487458..497784

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
EL139_RS02625 (NCTC6181_00535)	-	487463..488143 (-)	681	WP_111714790.1	type II CAAX endopeptidase family protein	-
EL139_RS02630 (NCTC6181_00536)	-	488246..488452 (-)	207	WP_111714788.1	helix-turn-helix transcriptional regulator	-
EL139_RS02635 (NCTC6181_00537)	-	488758..489954 (-)	1197	WP_111714785.1	acetate kinase	-
EL139_RS02640 (NCTC6181_00538)	comYH	490013..490966 (-)	954	WP_111714783.1	class I SAM-dependent methyltransferase	Machinery gene
EL139_RS02645 (NCTC6181_00539)	comGG	491029..491403 (-)	375	WP_111714780.1	competence type IV pilus minor pilin ComGG	-
EL139_RS02650 (NCTC6181_00540)	comGF	491381..491821 (-)	441	WP_111714778.1	competence type IV pilus minor pilin ComGF	-
EL139_RS02655 (NCTC6181_00541)	comGE	491802..492047 (-)	246	WP_231871990.1	competence type IV pilus minor pilin ComGE	-
EL139_RS02660 (NCTC6181_00542)	comGD	492055..492483 (-)	429	WP_111714773.1	competence type IV pilus minor pilin ComGD	-
EL139_RS02665 (NCTC6181_00543)	comYC	492458..492784 (-)	327	WP_111714771.1	competence type IV pilus major pilin ComGC	Machinery gene
EL139_RS02670 (NCTC6181_00544)	comYB	492786..493817 (-)	1032	WP_111717873.1	competence type IV pilus assembly protein ComGB	Machinery gene
EL139_RS02675 (NCTC6181_00545)	comGA/cglA	493753..494694 (-)	942	WP_111714768.1	competence type IV pilus ATPase ComGA	Machinery gene
EL139_RS02680 (NCTC6181_00546)	-	494775..495140 (-)	366	WP_003055257.1	DUF1033 family protein	-

Sequence

Protein

• Length: 108 a.a.
• Molecular weight: 12345.34 Da
• Isoelectric Point: 9.6248

>NTDB_id=1121208 EL139_RS02665 WP_111714771.1 492458..492784(-) (comYC) [Streptococcus dysgalactiae subsp. equisimilis strain NCTC6181]
MKNQWKPLRQYQLQAFTLLEMLLVILVISVLMLLFVPNLSKQKDRVTETGNAAVVKLVENQAELYELSQGSKPSLSQLKT
DGSITDKQVKAYTDYYEKHTNEKSSLKP

Nucleotide

• Length: 327 bp

>NTDB_id=1121208 EL139_RS02665 WP_111714771.1 492458..492784(-) (comYC) [Streptococcus dysgalactiae subsp. equisimilis strain NCTC6181]
ATGAAAAACCAATGGAAACCATTACGGCAATACCAACTACAAGCTTTCACACTTCTAGAAATGTTACTGGTGATTTTAGT
CATCAGTGTCTTAATGCTCTTATTTGTACCTAATTTAAGCAAACAAAAAGATAGGGTTACCGAAACAGGAAATGCTGCTG
TTGTCAAATTAGTGGAGAATCAAGCAGAGTTGTACGAATTATCGCAAGGATCAAAACCAAGTTTAAGTCAATTAAAGACA
GATGGCAGTATTACAGATAAACAGGTAAAAGCTTACACAGACTATTACGAAAAACATACCAATGAAAAGTCCAGTCTTAA
ACCTTAA

Domains

No domain identified.

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comYC	Streptococcus gordonii str. Challis substr. CH1	58.416	93.519	0.546
comGC	Lactococcus lactis subsp. cremoris KW2	53.271	99.074	0.528
comGC/cglC	Streptococcus mitis SK321	56.566	91.667	0.519
comGC/cglC	Streptococcus mitis NCTC 12261	55.556	91.667	0.509
comGC/cglC	Streptococcus pneumoniae TIGR4	54.545	91.667	0.5
comGC/cglC	Streptococcus pneumoniae D39	54.545	91.667	0.5
comGC/cglC	Streptococcus pneumoniae Rx1	54.545	91.667	0.5
comGC/cglC	Streptococcus pneumoniae R6	54.545	91.667	0.5
comYC	Streptococcus mutans UA140	56.383	87.037	0.491
comYC	Streptococcus mutans UA159	56.383	87.037	0.491
comYC	Streptococcus suis isolate S10	50.562	82.407	0.417