Detailed information NTG1120571

Bioinformatically predicted

Overview

• Name: comGD/cglD
• Type: Machinery gene
• Locus tag: EL096_RS07560
• Genome accession: NZ_LR134294
• Coordinates: 1401837..1402241 (-)
• Length: 134 a.a.
• NCBI ID: WP_000588020.1
• Uniprot ID: -
• Organism: Streptococcus pneumoniae strain NCTC12977
• Function: dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1396837..1407241

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
EL096_RS07525 (NCTC12977_01465)	rnpA	1397251..1397622 (-)	372	WP_000739246.1	ribonuclease P protein component	-
EL096_RS12050	-	1397639..1397770 (-)	132	WP_000768904.1	hypothetical protein	-
EL096_RS07530 (NCTC12977_01466)	-	1397771..1398961 (-)	1191	WP_000167766.1	acetate kinase	-
EL096_RS07535 (NCTC12977_01467)	comYH	1399012..1399965 (-)	954	WP_050308921.1	class I SAM-dependent methyltransferase	Machinery gene
EL096_RS07540	-	1400026..1400620 (-)	595	Protein_1404	class I SAM-dependent methyltransferase	-
EL096_RS07545 (NCTC12977_01470)	comGG/cglG	1400757..1401170 (-)	414	WP_050102600.1	competence type IV pilus minor pilin ComGG	Machinery gene
EL096_RS07550 (NCTC12977_01471)	comGF/cglF	1401148..1401609 (-)	462	WP_000250544.1	competence type IV pilus minor pilin ComGF	Machinery gene
EL096_RS07555 (NCTC12977_01472)	comGE/cglE	1401572..1401874 (-)	303	WP_000413380.1	competence type IV pilus minor pilin ComGE	Machinery gene
EL096_RS07560 (NCTC12977_01473)	comGD/cglD	1401837..1402241 (-)	405	WP_000588020.1	competence type IV pilus minor pilin ComGD	Machinery gene
EL096_RS07565 (NCTC12977_01474)	comGC/cglC	1402234..1402560 (-)	327	WP_000738632.1	comG operon protein ComGC	Machinery gene
EL096_RS07570 (NCTC12977_01475)	comGB/cglB	1402562..1403578 (-)	1017	WP_114880773.1	competence type IV pilus assembly protein ComGB	Machinery gene
EL096_RS07575 (NCTC12977_01476)	comGA/cglA/cilD	1403526..1404467 (-)	942	WP_000249549.1	competence type IV pilus ATPase ComGA	Machinery gene
EL096_RS07580 (NCTC12977_01477)	-	1404543..1404908 (-)	366	WP_000286415.1	DUF1033 family protein	-
EL096_RS07585 (NCTC12977_01478)	-	1405059..1406117 (-)	1059	WP_000649468.1	zinc-dependent alcohol dehydrogenase family protein	-

Sequence

Protein

• Length: 134 a.a.
• Molecular weight: 14662.89 Da
• Isoelectric Point: 10.2164

>NTDB_id=1120571 EL096_RS07560 WP_000588020.1 1401837..1402241(-) (comGD/cglD) [Streptococcus pneumoniae strain NCTC12977]
MIKAFTMLESLLVLGLVSILALGLSGSVQSTFAAVEEQIFFMEFEELYRETQKRSVASQQKTSLNLDGQTISNGSQKLPV
PKGIQVPSGQSITFDRAGGNSSLAKVEFQTSKGAIRYQLYLGNGKIKRIKETKN

Nucleotide

• Length: 405 bp

>NTDB_id=1120571 EL096_RS07560 WP_000588020.1 1401837..1402241(-) (comGD/cglD) [Streptococcus pneumoniae strain NCTC12977]
ATGATTAAGGCCTTTACCATGCTGGAAAGTCTCTTGGTTTTGGGTCTTGTGAGTATCCTTGCCTTGGGCTTGTCCGGCTC
TGTTCAGTCCACTTTTGCGGCAGTAGAGGAACAGATTTTCTTTATGGAATTTGAAGAACTCTATCGGGAAACCCAAAAAC
GCAGTGTAGCCAGTCAGCAAAAGACTAGTCTGAACTTAGATGGGCAGACGATTAGCAATGGCAGTCAAAAGTTGCCAGTC
CCTAAAGGAATTCAGGTCCCATCAGGCCAAAGTATTACATTTGACCGTGCTGGGGGCAATTCGTCCCTGGCTAAGGTTGA
ATTTCAGACCAGTAAAGGAGCGATTCGCTATCAATTATATCTAGGAAATGGAAAAATTAAACGCATTAAGGAAACAAAAA
ATTAG

Domains

No domain identified.

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comGD/cglD	Streptococcus pneumoniae TIGR4	97.761	100	0.978
comGD/cglD	Streptococcus pneumoniae Rx1	97.015	100	0.97
comGD/cglD	Streptococcus pneumoniae D39	97.015	100	0.97
comGD/cglD	Streptococcus pneumoniae R6	97.015	100	0.97
comGD/cglD	Streptococcus mitis SK321	96.269	100	0.963
comGD/cglD	Streptococcus mitis NCTC 12261	96.992	99.254	0.963
comYD	Streptococcus gordonii str. Challis substr. CH1	59.055	94.776	0.56
comYD	Streptococcus mutans UA140	50	95.522	0.478
comYD	Streptococcus mutans UA159	50	95.522	0.478