Detailed information NTG1120489

Bioinformatically predicted

Overview

• Name: comGC/cglC
• Type: Machinery gene
• Locus tag: EL097_RS02115
• Genome accession: NZ_LR134293
• Coordinates: 428917..429243 (-)
• Length: 108 a.a.
• NCBI ID: WP_003046186.1
• Uniprot ID: -
• Organism: Streptococcus canis strain NCTC12191
• Function: dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 423917..434243

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
EL097_RS02070 (NCTC12191_00402)	-	424166..424537 (-)	372	WP_003046201.1	hypothetical protein	-
EL097_RS02080 (NCTC12191_00403)	-	424695..424901 (-)	207	WP_003046200.1	helix-turn-helix transcriptional regulator	-
EL097_RS02085 (NCTC12191_00404)	-	425224..426420 (-)	1197	WP_003046198.1	acetate kinase	-
EL097_RS02090 (NCTC12191_00405)	comYH	426479..427432 (-)	954	WP_003046195.1	class I SAM-dependent methyltransferase	Machinery gene
EL097_RS02095 (NCTC12191_00406)	comGG	427482..427862 (-)	381	WP_003046193.1	competence type IV pilus minor pilin ComGG	-
EL097_RS02100 (NCTC12191_00407)	comGF	427840..428280 (-)	441	WP_003046192.1	competence type IV pilus minor pilin ComGF	-
EL097_RS02105 (NCTC12191_00408)	comGE	428261..428536 (-)	276	WP_003046190.1	competence type IV pilus minor pilin ComGE	-
EL097_RS02110 (NCTC12191_00409)	comGD	428514..428942 (-)	429	WP_039994748.1	competence type IV pilus minor pilin ComGD	-
EL097_RS02115 (NCTC12191_00410)	comGC/cglC	428917..429243 (-)	327	WP_003046186.1	competence type IV pilus major pilin ComGC	Machinery gene
EL097_RS02120 (NCTC12191_00411)	comYB	429246..430280 (-)	1035	WP_223824829.1	competence type IV pilus assembly protein ComGB	Machinery gene
EL097_RS02125 (NCTC12191_00412)	comYA	430213..431154 (-)	942	WP_003046182.1	competence type IV pilus ATPase ComGA	Machinery gene
EL097_RS02130 (NCTC12191_00413)	-	431241..431606 (-)	366	WP_003046179.1	DUF1033 family protein	-

Sequence

Protein

• Length: 108 a.a.
• Molecular weight: 12391.29 Da
• Isoelectric Point: 9.3348

>NTDB_id=1120489 EL097_RS02115 WP_003046186.1 428917..429243(-) (comGC/cglC) [Streptococcus canis strain NCTC12191]
MTNQWNNLRHKKLKGFTLLEMLLVILVISVLMLLFVPNLSKQKDRVTETGHTAVVKLVENQAELYELSQGSKPSLSQLKE
DGSITDKQEKAYRDYYGKHKDEKASLND

Nucleotide

• Length: 327 bp

>NTDB_id=1120489 EL097_RS02115 WP_003046186.1 428917..429243(-) (comGC/cglC) [Streptococcus canis strain NCTC12191]
ATGACAAACCAATGGAACAACTTACGACACAAGAAGCTAAAAGGATTTACTCTTCTTGAAATGTTATTGGTGATTCTTGT
CATCAGTGTTTTGATGCTATTATTTGTGCCAAATTTAAGCAAGCAAAAAGACAGGGTTACCGAGACAGGTCATACCGCTG
TTGTTAAATTAGTGGAGAATCAAGCGGAGCTATATGAATTATCTCAGGGTTCAAAACCAAGTTTGAGCCAACTGAAGGAA
GATGGTAGCATCACTGACAAACAAGAAAAAGCTTATCGCGACTATTATGGCAAACATAAAGATGAAAAAGCCAGTCTTAA
TGATTAA

Domains

Predicted by InterproScan.

• Prokaryotic N-terminal methylation motif (N_methyl) (12-34)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comGC/cglC	Streptococcus mitis SK321	55.446	93.519	0.519
comYC	Streptococcus gordonii str. Challis substr. CH1	56.566	91.667	0.519
comGC	Lactococcus lactis subsp. cremoris KW2	54.902	94.444	0.519
comGC/cglC	Streptococcus pneumoniae R6	50.926	100	0.509
comGC/cglC	Streptococcus pneumoniae Rx1	50.926	100	0.509
comGC/cglC	Streptococcus pneumoniae D39	50.926	100	0.509
comGC/cglC	Streptococcus pneumoniae TIGR4	53.465	93.519	0.5
comGC/cglC	Streptococcus mitis NCTC 12261	57.609	85.185	0.491
comYC	Streptococcus mutans UA140	58.621	80.556	0.472
comYC	Streptococcus mutans UA159	58.621	80.556	0.472
comYC	Streptococcus suis isolate S10	52.273	81.481	0.426