Detailed information
Bioinformatically predicted
Overview
| Name | comYH | Type | Machinery gene |
| Locus tag | EL097_RS02090 | Genome accession | NZ_LR134293 |
| Coordinates | 426479..427432 (-) | Length | 317 a.a. |
| NCBI ID | WP_003046195.1 | Uniprot ID | A0AAE4Q9T5 |
| Organism | Streptococcus canis strain NCTC12191 | ||
| Function | dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 421479..432432
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| EL097_RS02060 (NCTC12191_00400) | pepA | 422071..423138 (+) | 1068 | WP_003046205.1 | glutamyl aminopeptidase | - |
| EL097_RS02065 (NCTC12191_00401) | proC | 423186..423962 (+) | 777 | WP_003046203.1 | pyrroline-5-carboxylate reductase | - |
| EL097_RS02070 (NCTC12191_00402) | - | 424166..424537 (-) | 372 | WP_003046201.1 | hypothetical protein | - |
| EL097_RS02080 (NCTC12191_00403) | - | 424695..424901 (-) | 207 | WP_003046200.1 | helix-turn-helix transcriptional regulator | - |
| EL097_RS02085 (NCTC12191_00404) | - | 425224..426420 (-) | 1197 | WP_003046198.1 | acetate kinase | - |
| EL097_RS02090 (NCTC12191_00405) | comYH | 426479..427432 (-) | 954 | WP_003046195.1 | class I SAM-dependent methyltransferase | Machinery gene |
| EL097_RS02095 (NCTC12191_00406) | comGG | 427482..427862 (-) | 381 | WP_003046193.1 | competence type IV pilus minor pilin ComGG | - |
| EL097_RS02100 (NCTC12191_00407) | comGF | 427840..428280 (-) | 441 | WP_003046192.1 | competence type IV pilus minor pilin ComGF | - |
| EL097_RS02105 (NCTC12191_00408) | comGE | 428261..428536 (-) | 276 | WP_003046190.1 | competence type IV pilus minor pilin ComGE | - |
| EL097_RS02110 (NCTC12191_00409) | comGD | 428514..428942 (-) | 429 | WP_039994748.1 | competence type IV pilus minor pilin ComGD | - |
| EL097_RS02115 (NCTC12191_00410) | comGC/cglC | 428917..429243 (-) | 327 | WP_003046186.1 | competence type IV pilus major pilin ComGC | Machinery gene |
| EL097_RS02120 (NCTC12191_00411) | comYB | 429246..430280 (-) | 1035 | WP_223824829.1 | competence type IV pilus assembly protein ComGB | Machinery gene |
| EL097_RS02125 (NCTC12191_00412) | comYA | 430213..431154 (-) | 942 | WP_003046182.1 | competence type IV pilus ATPase ComGA | Machinery gene |
| EL097_RS02130 (NCTC12191_00413) | - | 431241..431606 (-) | 366 | WP_003046179.1 | DUF1033 family protein | - |
Sequence
Protein
Download Length: 317 a.a. Molecular weight: 35915.02 Da Isoelectric Point: 4.7866
>NTDB_id=1120488 EL097_RS02090 WP_003046195.1 426479..427432(-) (comYH) [Streptococcus canis strain NCTC12191]
MNFEKIEEAYQLLLENSQLIENDLKTHIYDAIVEQNSFYLGAEGASPQVAQNIDKLKALCLTKEEWRRAYQFIFIKAAQT
EQLQANHQFTPDTIGFILLYLLEQLSDKDSLEVLEIGSGTGNLAQTLLNNTSKSLDYVGIELDDLLIDLSASIAEVMDSS
AHFIQEDAVRPQLLKESDVVISDLPVGYYPNDAIAKRYKVASSDEHTYAHHLLMEQSLKYLKKDGFAIFLAPVNLLTSPQ
SQLLKHWLKGYAQVVALITLPDTIFGHPSNAKSIIVLQKQTDRPMETFVYPIRDLKLAENIHALMDNFKKWKLDNVN
MNFEKIEEAYQLLLENSQLIENDLKTHIYDAIVEQNSFYLGAEGASPQVAQNIDKLKALCLTKEEWRRAYQFIFIKAAQT
EQLQANHQFTPDTIGFILLYLLEQLSDKDSLEVLEIGSGTGNLAQTLLNNTSKSLDYVGIELDDLLIDLSASIAEVMDSS
AHFIQEDAVRPQLLKESDVVISDLPVGYYPNDAIAKRYKVASSDEHTYAHHLLMEQSLKYLKKDGFAIFLAPVNLLTSPQ
SQLLKHWLKGYAQVVALITLPDTIFGHPSNAKSIIVLQKQTDRPMETFVYPIRDLKLAENIHALMDNFKKWKLDNVN
Nucleotide
Download Length: 954 bp
>NTDB_id=1120488 EL097_RS02090 WP_003046195.1 426479..427432(-) (comYH) [Streptococcus canis strain NCTC12191]
ATGAATTTTGAAAAAATTGAAGAAGCTTATCAGTTGCTTTTAGAGAATAGCCAACTGATTGAAAATGACTTAAAAACCCA
TATTTATGATGCCATTGTTGAACAAAACTCCTTTTATTTAGGGGCAGAGGGAGCCAGTCCTCAGGTGGCTCAAAACATTG
ATAAACTGAAAGCCTTGTGCCTGACAAAAGAAGAATGGCGCAGAGCCTACCAGTTTATTTTTATTAAGGCAGCTCAGACT
GAACAACTGCAAGCCAACCATCAGTTCACACCAGATACTATTGGTTTTATTCTTCTCTATCTGTTGGAACAATTGAGCGA
TAAAGATAGCTTAGAGGTGCTTGAAATTGGGAGTGGAACAGGGAACCTAGCTCAAACCCTTCTCAACAACACGAGCAAGT
CTCTTGATTATGTAGGAATTGAACTTGATGATCTCTTGATTGATTTGTCAGCCAGCATTGCAGAGGTGATGGATTCTTCA
GCTCATTTTATTCAAGAAGATGCAGTAAGACCTCAATTATTGAAAGAAAGTGATGTTGTCATCAGTGACTTGCCAGTTGG
CTATTATCCTAACGATGCTATTGCCAAACGTTACAAGGTGGCTAGTTCAGATGAGCATACGTATGCTCACCATTTATTAA
TGGAACAGTCTCTAAAATACTTGAAAAAAGATGGCTTTGCGATTTTTCTGGCACCAGTCAATTTATTGACGAGCCCTCAG
AGCCAGTTATTGAAACATTGGTTAAAAGGATATGCTCAGGTGGTGGCTCTAATTACTCTACCAGACACCATTTTTGGTCA
TCCATCCAATGCCAAGTCTATTATTGTCTTGCAAAAACAAACAGACCGCCCAATGGAAACCTTTGTTTATCCAATTCGGG
ACTTGAAACTTGCAGAGAATATTCATGCTCTTATGGATAATTTCAAAAAGTGGAAACTGGATAATGTCAATTAA
ATGAATTTTGAAAAAATTGAAGAAGCTTATCAGTTGCTTTTAGAGAATAGCCAACTGATTGAAAATGACTTAAAAACCCA
TATTTATGATGCCATTGTTGAACAAAACTCCTTTTATTTAGGGGCAGAGGGAGCCAGTCCTCAGGTGGCTCAAAACATTG
ATAAACTGAAAGCCTTGTGCCTGACAAAAGAAGAATGGCGCAGAGCCTACCAGTTTATTTTTATTAAGGCAGCTCAGACT
GAACAACTGCAAGCCAACCATCAGTTCACACCAGATACTATTGGTTTTATTCTTCTCTATCTGTTGGAACAATTGAGCGA
TAAAGATAGCTTAGAGGTGCTTGAAATTGGGAGTGGAACAGGGAACCTAGCTCAAACCCTTCTCAACAACACGAGCAAGT
CTCTTGATTATGTAGGAATTGAACTTGATGATCTCTTGATTGATTTGTCAGCCAGCATTGCAGAGGTGATGGATTCTTCA
GCTCATTTTATTCAAGAAGATGCAGTAAGACCTCAATTATTGAAAGAAAGTGATGTTGTCATCAGTGACTTGCCAGTTGG
CTATTATCCTAACGATGCTATTGCCAAACGTTACAAGGTGGCTAGTTCAGATGAGCATACGTATGCTCACCATTTATTAA
TGGAACAGTCTCTAAAATACTTGAAAAAAGATGGCTTTGCGATTTTTCTGGCACCAGTCAATTTATTGACGAGCCCTCAG
AGCCAGTTATTGAAACATTGGTTAAAAGGATATGCTCAGGTGGTGGCTCTAATTACTCTACCAGACACCATTTTTGGTCA
TCCATCCAATGCCAAGTCTATTATTGTCTTGCAAAAACAAACAGACCGCCCAATGGAAACCTTTGTTTATCCAATTCGGG
ACTTGAAACTTGCAGAGAATATTCATGCTCTTATGGATAATTTCAAAAAGTGGAAACTGGATAATGTCAATTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comYH | Streptococcus mutans UA140 |
66.772 |
99.685 |
0.666 |
| comYH | Streptococcus mutans UA159 |
66.456 |
99.685 |
0.662 |