Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Machinery gene
Locus tag   EL111_RS02130 Genome accession   NZ_LR134287
Coordinates   443928..445172 (-) Length   414 a.a.
NCBI ID   WP_269471079.1    Uniprot ID   -
Organism   Neisseria animalis strain NCTC10212     
Function   assembly of type IV pilus (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 438928..450172
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  EL111_RS02100 (NCTC10212_00424) aat 439064..439819 (-) 756 WP_123795653.1 leucyl/phenylalanyl-tRNA--protein transferase -
  EL111_RS02105 (NCTC10212_00425) lspA 439988..440485 (+) 498 WP_123795652.1 signal peptidase II -
  EL111_RS02110 (NCTC10212_00426) ispH 440578..441546 (+) 969 WP_123795651.1 4-hydroxy-3-methylbut-2-enyl diphosphate reductase -
  EL111_RS10465 - 441645..441818 (-) 174 WP_162842984.1 hypothetical protein -
  EL111_RS02115 (NCTC10212_00427) yacG 442173..442361 (-) 189 WP_197717779.1 DNA gyrase inhibitor YacG -
  EL111_RS02120 (NCTC10212_00428) coaE 442413..443033 (-) 621 WP_123795649.1 dephospho-CoA kinase -
  EL111_RS02125 (NCTC10212_00429) pilD 443066..443926 (-) 861 WP_123795648.1 prepilin peptidase Machinery gene
  EL111_RS02130 (NCTC10212_00430) pilG 443928..445172 (-) 1245 WP_269471079.1 type II secretion system F family protein Machinery gene
  EL111_RS02135 (NCTC10212_00431) pilF 445181..446860 (-) 1680 WP_123795647.1 type IV-A pilus assembly ATPase PilB Machinery gene
  EL111_RS02140 (NCTC10212_00432) - 447416..447922 (-) 507 WP_123795646.1 pilin -

Sequence

Protein


Download         Length: 414 a.a.        Molecular weight: 45810.87 Da        Isoelectric Point: 9.9076

>NTDB_id=1120200 EL111_RS02130 WP_269471079.1 443928..445172(-) (pilG) [Neisseria animalis strain NCTC10212]
MSRSHKTLAAFFSMGGKDRRFAFEGKNIYTDRLVRGEVVAADEEEARKKLQRRGIRPLRIDKVKTVRTRKITQEDITVFT
RQLATMMKAGLPLLQAFDIIARGHSNPAVTQMLTGIRTDVEQGSSLAVSFGKYPKYFDRFYCNLVAAGETGGVLETLLDK
LATYREKTLAVKRKIKTMMIYPMAILVVSSGLVFVMMRFVLPAFKEIYTNMGAQLPLLTQYAINLSDFVVEYGWLLLVAT
IVAGVSLYRLHEKSYSLQKRTDALLLRTPLFGSIVRKAAIARWSRTLSTLFAAGVPLVEVLDSVAAASGNLLYEEATLDI
RAQVTQGLSLASSMQPTNMFPNMVVQMAAVGEESGALDDMLNKAAEFYEDEVDNLISRLSALIEPIIMIVIGVTVGILLI
AMYLPLLNLGKAVG

Nucleotide


Download         Length: 1245 bp        

>NTDB_id=1120200 EL111_RS02130 WP_269471079.1 443928..445172(-) (pilG) [Neisseria animalis strain NCTC10212]
ATGTCCCGCTCCCATAAAACACTTGCTGCTTTTTTCAGCATGGGCGGAAAAGACCGCCGCTTTGCCTTTGAAGGCAAAAA
TATTTATACCGACCGTCTTGTCCGCGGCGAAGTTGTGGCGGCAGATGAAGAGGAAGCCCGCAAAAAGCTGCAACGACGCG
GTATCCGCCCTTTGCGTATCGACAAGGTAAAAACCGTCCGCACACGCAAGATTACGCAAGAAGACATTACGGTTTTTACC
CGCCAACTAGCCACCATGATGAAAGCGGGGCTGCCGCTGCTCCAAGCATTCGACATCATCGCACGCGGCCACTCCAACCC
TGCGGTCACGCAAATGCTGACCGGTATCCGCACCGATGTGGAACAGGGCAGCTCTCTTGCCGTATCGTTTGGCAAATATC
CGAAATATTTCGACCGTTTTTACTGTAATCTGGTTGCAGCAGGTGAAACCGGCGGCGTATTGGAAACGCTGCTCGACAAG
CTGGCAACTTATCGTGAAAAAACGCTGGCCGTCAAAAGAAAAATTAAAACCATGATGATTTACCCGATGGCGATTCTGGT
GGTGTCGTCAGGCTTGGTGTTTGTCATGATGCGCTTCGTATTGCCTGCTTTCAAAGAAATCTATACCAATATGGGCGCGC
AACTGCCGCTGTTGACGCAATATGCCATCAACCTTTCCGATTTTGTGGTCGAATACGGTTGGCTGCTGCTGGTTGCGACC
ATTGTTGCCGGCGTGTCGCTGTACCGTCTGCATGAAAAATCATACAGCCTGCAAAAGCGCACCGATGCCTTGCTGCTGCG
GACACCACTGTTCGGCAGCATTGTCCGCAAAGCCGCCATCGCCCGCTGGTCGCGTACTTTATCGACGCTCTTTGCCGCCG
GCGTGCCGCTGGTAGAGGTTTTGGACTCGGTTGCCGCCGCTTCGGGCAATCTGCTGTACGAAGAAGCCACCCTCGATATT
CGGGCGCAGGTAACACAAGGCTTGTCGCTGGCTTCCAGTATGCAGCCAACCAATATGTTTCCCAATATGGTGGTGCAAAT
GGCGGCGGTCGGGGAAGAATCCGGCGCGTTGGACGATATGCTCAACAAAGCCGCCGAATTTTATGAAGACGAAGTGGACA
ATCTGATTTCACGGCTTTCCGCCCTGATTGAACCGATTATCATGATTGTCATCGGCGTAACCGTCGGTATCCTGCTGATT
GCCATGTATCTGCCCTTATTGAATTTGGGCAAGGCGGTAGGCTGA

Domains

Predicted by InterproScan.

Type II secretion system (T2SS), protein F (T2SSF)

(283-405)

Type II secretion system (T2SS), protein F (T2SSF)

(79-202)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Neisseria gonorrhoeae MS11

64.987

95.894

0.623
  pilG Neisseria meningitidis 44/76-A

64.484

95.894

0.618
  pilC Pseudomonas stutzeri DSM 10701

45.137

96.86

0.437
  pilC Legionella pneumophila strain ERS1305867

44.361

96.377

0.428
  pilC Acinetobacter baumannii D1279779

43.641

96.86

0.423
  pilC Acinetobacter baylyi ADP1

43.358

96.377

0.418
  pilC Thermus thermophilus HB27

38.56

93.961

0.362

Multiple sequence alignment