Detailed information NTG1119545

Bioinformatically predicted

Overview

• Name: comGD/cglD
• Type: Machinery gene
• Locus tag: EL081_RS01080
• Genome accession: NZ_LR134266
• Coordinates: 186668..187093 (+)
• Length: 141 a.a.
• NCBI ID: WP_042507426.1
• Uniprot ID: -
• Organism: Streptococcus viridans strain NCTC3166
• Function: dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 181668..192093

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
EL081_RS01055 (NCTC3166_00214)	-	182685..183788 (+)	1104	WP_126403663.1	glycosyl hydrolase family 8	-
EL081_RS01060 (NCTC3166_00215)	-	183996..184373 (+)	378	WP_048717460.1	DUF1033 family protein	-
EL081_RS01065 (NCTC3166_00216)	comYA	184480..185421 (+)	942	WP_126403664.1	competence type IV pilus ATPase ComGA	Machinery gene
EL081_RS01070 (NCTC3166_00217)	comYB	185363..186385 (+)	1023	WP_126403665.1	competence type IV pilus assembly protein ComGB	Machinery gene
EL081_RS01075 (NCTC3166_00218)	comYC	186382..186699 (+)	318	WP_023022076.1	competence type IV pilus major pilin ComGC	Machinery gene
EL081_RS01080	comGD/cglD	186668..187093 (+)	426	WP_042507426.1	competence type IV pilus minor pilin ComGD	Machinery gene
EL081_RS01085 (NCTC3166_00220)	comGE	187059..187352 (+)	294	WP_006595134.1	competence type IV pilus minor pilin ComGE	-
EL081_RS01090 (NCTC3166_00221)	comGF/cglF	187336..187788 (+)	453	WP_048717662.1	competence type IV pilus minor pilin ComGF	Machinery gene
EL081_RS01095 (NCTC3166_00222)	comGG	187754..188200 (+)	447	WP_126403667.1	competence type IV pilus minor pilin ComGG	-
EL081_RS01100 (NCTC3166_00223)	comYH	188232..189185 (+)	954	WP_126403668.1	class I SAM-dependent methyltransferase	Machinery gene
EL081_RS01105 (NCTC3166_00224)	-	189234..190430 (+)	1197	WP_126403669.1	acetate kinase	-
EL081_RS01110 (NCTC3166_00225)	-	190583..191257 (+)	675	WP_224781595.1	type II CAAX endopeptidase family protein	-

Sequence

Protein

• Length: 141 a.a.
• Molecular weight: 15748.24 Da
• Isoelectric Point: 7.2775

>NTDB_id=1119545 EL081_RS01080 WP_042507426.1 186668..187093(+) (comGD/cglD) [Streptococcus viridans strain NCTC3166]
MQVITVRLQIKAFTLLESLLTLGIVSLLCWLLAGSVHQAFGQVEETLFFSEFERVYQETQKMSIAKEERALLSIDHGGVH
SPYQELPLPKGVEVVREKQLTFDPAGGNSSLTKIQFQTEKEVVTYQLAIGNGKIKKSTAPR

Nucleotide

• Length: 426 bp

>NTDB_id=1119545 EL081_RS01080 WP_042507426.1 186668..187093(+) (comGD/cglD) [Streptococcus viridans strain NCTC3166]
ATGCAGGTGATCACCGTGCGGTTGCAGATTAAAGCTTTCACCCTTCTAGAGAGCTTACTAACTCTAGGTATCGTCAGTCT
TCTATGTTGGCTGCTAGCTGGGTCAGTCCATCAAGCCTTTGGGCAGGTGGAAGAAACATTGTTTTTCTCGGAATTTGAAC
GGGTCTATCAGGAGACACAAAAGATGAGTATTGCAAAAGAGGAGAGAGCTCTCCTTTCCATCGACCACGGTGGGGTTCAT
AGTCCCTATCAAGAATTACCGCTTCCAAAAGGGGTGGAAGTGGTCAGAGAGAAGCAACTGACCTTTGATCCAGCAGGAGG
CAATTCAAGCCTGACCAAGATTCAATTTCAGACAGAGAAAGAGGTGGTGACTTATCAGTTGGCAATTGGGAATGGAAAAA
TTAAAAAATCGACGGCTCCCCGCTAG

Domains

No domain identified.

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comGD/cglD	Streptococcus mitis NCTC 12261	52.713	91.489	0.482
comGD/cglD	Streptococcus pneumoniae TIGR4	52.756	90.071	0.475
comGD/cglD	Streptococcus pneumoniae D39	51.969	90.071	0.468
comGD/cglD	Streptococcus pneumoniae R6	51.969	90.071	0.468
comGD/cglD	Streptococcus pneumoniae Rx1	51.969	90.071	0.468
comYD	Streptococcus gordonii str. Challis substr. CH1	50	93.617	0.468
comGD/cglD	Streptococcus mitis SK321	51.181	90.071	0.461
comYD	Streptococcus mutans UA140	48.462	92.199	0.447
comYD	Streptococcus mutans UA159	48.462	92.199	0.447